Detail



ID : Ahg325967

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325967|fgenesh1_pm.C_scaffold_6001187
Sequence
ATGATCTCCT GGCTCGATAT CTACCATGTT GTTTCAGCAA CTGTTCCTCT CTATGTCTCA ATGACCTTAG GTTTCCTCTC TGCAAAACAT ATAAAGCTCT TCTCACCCGA GCAATGCGCA GGCATCAACA AATTCGTCGC CAAATTCTCA ATCCCTTTGC TTTCTTTTCA AATAATCTCT CAAAACAACC CCTATAAGAT GAGCCCTAAA CTCATTCTCT CTGACATTCT CCAGAAAATC TTAGCCGTTG TTGTATTAGC CGCGGTTTTA AGATTCTGGC ATCCACCAGG AGGAAGAGGA GGAAAATTGG GTTGGCTCAT AACCGGTTTA TCTATATCGG TGTTGCCAAA CACTCTCATT CTTGGAATCC CAATCTTGAG TGCCATCTAT GGAGATGAAG CTGCGAGCAT CTTGGAGCAG ATTGTTGTGT TGCAAAGCTT GATTTGGTAT AGCATCTTGC TCTTCTTGTT CGAGCTTAAT GCCGCAAGGG CGTTACCTTC ATCTGGACCT TCCTTAGAAT ATACAGGCAA TGACCATGAA GAGGCTAATA TAGAGGAAGA GCCAAAAGAA GAAAACGAAG AAGAAGTAGC AATAGTGAGA ACAAGATCTA TTGGAACTAT GAAGATTTTA TTGAAGGCTT GGAGAAAGCT TATAATCAAT CCTAATACAT ACGCAACATT GATCGGAATC ATTTGGGCTA CTTTACATTT CAGATTGGGA TGGAATTTGC CAGAGATGAT TGATAAATCA ATACATTTAT TATCTGATGG AGGCTTAGGA ATGGCCATGT TCAGCTTAGG TCTTTTCATG GCATCACAAA GTAGTATCAT AGCATGTGGA ACAAAAATGG CGATTATAAC AATGCTCCTC AAGTTCGTAT TAGGACCTGC TCTTATGATT GCTTCCGCGT TTTGCATCAG ATTAAGAAGT ACTCTCTTCA AAGTCGCAAT ATTACAGGCT GCATTGCCTC AAGGAGTAGT GCCATTTGTT TTTGCAAAAG AGTATAATCT TCATCCGGAG ATCATTAGTA CCCCTGGTGA TCTTTGGAAT GCTAATTGCC TTACCAACAA CTTTGGCATA TTATTTTCTA TTGGACCTAT GAATATGACA TGTTAA 
Length1116
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5884838.. 5887107
Download Sequence
A.thaliana
AGI-codeAT5G15100.1
DescriptionAuxin efflux carrier family protein
TAIR curator summary
Alias[ATPIN8][PIN8][PIN-FORMED 8]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg946682
7.68115 Ahg496930 Protein kinase superfamily protein
7.74597 Ahg904610 Plant protein of unknown function (DUF946)
9.79796 Ahg922696
20.3715 Ahg919765
21.6333 Ahg905359
21.6333 Ahg471303
24.1039 Ahg936922
29.7321 Ahg951928
30.4467 Ahg320180 SKU5 similar 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression