Detail



ID : Ahg326737

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326737|fgenesh1_pm.C_scaffold_6001957
Sequence
ATGGCTGTCG CAGAAAATGT TGGTGTGAAG GTGGATTCTT CTGATGATCA AAATTTAGAC AACAATACTA CTTCATTAGC AGAGACAAAA CCGTCATGTC CTGATGACCA GACACCTAAA TCCAATTCCT CTGTTCTCAC AAACGAATTG ATCCAAAGAA CCAGTGAAGT GGATCTCATG AGTGAGATAA GTCGTTTGAA TCCGATGGCT AAGGAATTTG TCCCTTCTTT TCTTGCTCAA ACCCACTCTG AGTTTTTGAG AAGTAGATTA TGGTTCACTA ACAATTTTCC AGTGCAAGCT ATTTCTACAA TGAGAAGGAG CTTTGGCCAA GGGAGGCGAT GGATTAACAA AAAAACAAAC TTGGTTCAGA ATGAAGATGT AATCAAGAGA ACTGTATATG TCTCAGACAT CGATCAACAA GTTACTGAGG AGCAACTTGC AAGTCTCTTT CTTTCTTGTG GCCAGGTTGT TGATTGCCGT ATATGCGGTG ACCATAAGTC CATTCTTCGT TTCGCCTTCA TTGAGTTCAC CGATGCAGAG GGAGCTAGGT CTGCCTTACG AAAATCGGGT ACTGTGTTTG GTTCTCATCC TATTAGGGTT CATATTTCCA AAACAGCTAT TGCACCTGTT AACCCGTCGT TCCTTCCACG GTCCGAGGAA GAGCTAGAGA AGTGTGGAAA GACAGTTTAT TGTACCAACA TTGACAAGCA GGTCACTAAG ATGGAGTTGG AAAATTTCTT TAAAACTGTT TGTGGGGAGG TTCACCATCT GAGGTTGCTT GGAGACTTTT ACCACCAAAC CCGCATTGCT TTTGTCGAAT TTAAGCTGGC AGAAAGTGCA ATTTCTGCTC TTAATTACAG TGGTGTTGTC TTGGGAGAGC TCCCAATAAG GATAAGCCCA TCAAAGACGC CAGTGAGGCC ACACCACTCT GATTTAAACT AA 
Length942
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10088437.. 10090600
Download Sequence
A.thaliana
AGI-codeAT5G24440.1
DescriptionCTC-interacting domain 13
TAIR curator summaryRNA-binding protein, putative. Contains PAM2, PABC binding domain.
Alias[CID13][CTC-interacting domain 13]
Gene coexpression
MR
MR Locus Description
2 Ahg949435
2.82843 Ahg492081 seed storage albumin 1
4.24264 Ahg916419
4.24264 Ahg906232
4.89898 Ahg925736 type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein
5.74456 Ahg348672
11.6189 Ahg933471
12.6095 Ahg897026
15.0997 Ahg906696 roline-rich extensin-like receptor kinase 4
15.1987 Ahg936152 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression