Detail



ID : Ahg906696

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906696|Al_scaffold_0003_3824
Sequence
ATGGCTTCTT CTCCTGATTC TGCTCCTCCT CCAACAAACT CCAGCTCTTC TCCATCTCCA CCGTCTAATA CCAATTCAAC CACCTCTTCT CCGCCGGCTC CGTCTCCTCC TTCTCCTACT CCTCCTCAAG GAGACTCGTC ATCGTCTCCA CCTCCTGGAT CCACATCTCC ACCAGCTCAA CAAGCTCCTT CTCCTCCTAA TTCCTCTAAT ACTTCGCCTT CACCACCGTC ACAAGGCGGT GGAGGAGAAA GAGGAAATGG AGGAAACAGT GGTGGAAATG ATTCTCCACC GTCGCGCGGC TCTCCTCCTT CTCCTCCTTC TAGGAGTAAT GGAGATAATG GTGGTAGCAG ATCATCGCCA CCAGGAGACA CTGGAGGCTC TCGCTCGGAC AATCCTCCTT CTAGCGGAGG TGCCAGCGGA AGCAGTGGAG GTGGAGGAGG AGGAGGAGGA GGAAGTAATA CGAATACGGC GATCATAGTT GGTGTATTAG TCGGAGCTGG ACTTTTGATG ATCGTTCTTA TTATTGTTTG TCTTAGACGC AAAAAGAAGA GAAAAGATTC CTTCTACCCT GAATCCATGA AAGGAAATCA ATATCAATAC TATGGAAACA ACAACAACAA CAACAATGCT TCACAGAATT ATCCAAATTG GCACCTAAAT GCACAAGGCC AAAACCAACA ATCTACTGGT GGTTGGGGAG GCGGTGGACC ATCACCACCT CCTCCCCCGC GGATGCCTAC AAGCGGAGAA GATTCTGCCT TGTACTCAGG CCCATCACGC CCGGTTTTAC CTCCTCCTTC GCCTGCTCTA GCCCTCGGAT TCAATAAGAG TACTTTTACT TACCAAGAGC TTGCGGCTGC AACGGGAGGG TTTACGGATG CTAACCTCTT GGGACAGGGA GGATTCGGGT ATGTCCATAA AGGAGTTTTG CCTAGTGGGA AAGAAGTAGC AGTTAAGAGC TTAAAAGCGG GTAGCGGACA AGGAGAGAGG GAGTTTCAAG CTGAGGTCGA TATCATTAGC CGTGTTCATC ATCGATATCT TGTTTCTTTG GTTGGATACT GCATAGCTGA TGGACAGAGG ATGTTGGTTT ATGAGTTTGT TCCTAACAAT ACTTTGGAAT ATCATCTTCA TGGGAAAAAT CTTCCGGTAA TGGATTTCTC CACTAGATTG CGTATCGCCT TAGGTGCTGC TAAAGGACTC GCTTACCTTC ACGAAGACTG CCATCCTCGG ATCATTCACC GCGACATCAA GTCTGCAAAC ATTCTCTTGG ACTTCAACTT TGATGCAATG GTGGCTGATT TTGGACTGGC AAAGTTAACT TCTGATAACT ACACTCATGT ATCTACTCGT GTGATGGGAA CTTTTGGTTA TGTAGCACCG GAATATGCAT CGAGCGGTAA ATTAACCGAG AAATCCGATG TTTTCTCTTA CGGTGTCATG TTATTGGAAC TGATCACTGG AAAACGACCG GTTGATAATA GCAGCACCAT GGATGACACC TTAGTAGATT GGGCTCGGCC TCTTATGGCT CCCGCACTAG AAGATGGAAA CTTTAATGAG CTCGCAGATG CAAGGCTTGA AGGCAACTAC AACCCGCAAG AAATGGCTCG AATGGTGACT TGTGCCGCTG CTAGCATTCG CCATTCCGGG CGTAAACGTC CAAAGATGAG CCAGATAGTA AGAGCATTAG AAGGAGAAGT GTCCTTAGAT GCTTTAAACG AAGGTGTGAA GCCAGGACAC AGTAACGTTT ACGGGACATC GGGAACAAGT TCGGATTATA GTCAGACATC TTACAATGCA GACATGAAGA AATTCAGACA GATAGCTTTA TCGAGCCAAG AATTCCCAAT CAGTGACTGT GAAGGAACAT CTAGTAATGA TTCTCGAGAG ATGGGACCTA AAAGCCCTGC TCCTCCTCAA TGA 
Length1923
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21455905.. 21458432
Download Sequence
A.thaliana
AGI-codeAT2G18470.1
Descriptionroline-rich extensin-like receptor kinase 4
TAIR curator summaryProline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.
Alias[AtPERK4][PERK4][proline-rich extensin-like receptor kinase 4]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg910850 HSP40/DnaJ peptide-binding protein
15.0997 Ahg326737 CTC-interacting domain 13
16.9115 Ahg949368
21.166 Ahg926312
36.4966 Ahg496561 RING/U-box superfamily protein
44.5982 Ahg359386
59.397 Ahg923015
61.2372 Ahg358858
61.7576 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
64.4205 Ahg932913
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression