Detail


ID : Ahg326985

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326985|fgenesh1_pm.C_scaffold_6002205
Sequence
ATGCTAGTAC TGTTTGAGAC GTCAGGTGGT TTTGCACTCT TTAAAGTATT AGATGAAGGA AAGCTCTCTA ATGTTGAGGA TTTGGGTGAT GAGTTCTCGT CTGCAGAGTC AGCTCGAAGG GGAACTTCAA GCAAAGGTCT ACGCAAGTTC TTGAAAAATA ACTGTGGTGA TGGTGAAACC TTAGCGGTGG CTGATTCAAA TATTGGAAAT ATTATCACTG AGAAACTGGA CGTACAATGT GTTCACAACA ACGCTGTTAT GGAGCTATTA CGCGGTGTGA GAAGCCAGTT AACCGAACTT TTATCCGGAT TGGATGATAA CGATTTAGCT CCAATGAGCC TGGAATTGTC TCACATCCTT GCTAGATATA AACTAAAAAT CACCTCTGAT AAGGTGGAGA CCATGATAAT CCAAGTTATT GGTCTTCTTG ATGATCTTGA CAAAGAGCGT AACACTTACG CTATGAGGGT TCGTGAATGG TATGGTTGGC ATTTTCCCGA GCTTGCGAAG ATCGTACAGG ACAATATCTT ATATGCCAAG GCTGTTAAAC TAATGGGGAA TCGGATTAAT GCTGCAAATC TAGACTTCTC CGAGATATTG GCTGATGAAG TTGAAGCAGA ACTTAAAGAG GTTGCTGTGA TATCTATGGG AACTGAAGTC ACTGACCTTG ATTTGATTCA CATCCGACAA CTCTGTGACC AGATTCTGTC TCTTGCTGAG TACAGAGCTC AGCTTAATGA CTACTTGAAG AGTAGAATGA ACAAAATTGC ACCAAATCTA ACTGCCCTTG TCGGGGAGCT AGTCGGTGCT CGCCTTATTT CTCATTGTGG TAGTCTATTA AACCTCGCAA AGCTACCTGG GAGCACGATT CAGATTCTTG GAGCTGAAAA GGCCCTATAT AGAGCCCGCA GGATGAACCA CGCCACTCCA AAGCACGGTC TGATTTACCA TGCACCTGTG GTTAGCCAAG CTGCACCAGA GCACAAGGGT AAAATCTCAC GGTCATTAGC TGCAAAAGCT GTTCTTGCTA TCCGTTGTGA TGCTTTTGGT GATGGACAAG ACAACACAAT GGGAGTGGAA ACCCGCTTAA AGCTGGAAGC GCGTTTGAGA AATCTTGAAG GAGGGGATTT AGGAGCCTTC GAAGAAGAAG AAGTTTATTA CAAAGATAAA AAGAAGAAGG CTGATGATGA GGAAGAACCC AAAACTGAGG AGCCTTCGAA GAAGAAGAAG ACAGAAGCAG AACTTGAAAC CGCCAAAGAG CCCGTAAAGA AGAGTAAACA CGAGGGTGTT ACAGGATTAT TAATCCTGAT TTTCTTAATT CCTCTTATTT ATTTCGTTTA TGTTAACCAG TTAGCTTGCT AA
Length1362
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12471403.. 12473371
Download Sequence
A.thaliana
AGI-codeAT5G27140.1
DescriptionNOP56-like pre RNA processing ribonucleoprotein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.3073 Ahg477561
22.3607 Ahg484606
39.5601 Ahg477974 fip1 motif-containing protein
45.5961 Ahg354188 CCT motif family protein
48.518 Ahg485301 Transcription factor IIIC, subunit 5
51.8749 Ahg489610 NOP56-like pre RNA processing ribonucleoprotein
56.7803 Ahg484880 histone deacetylase 3
66.4078 Ahg324027 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
70.0286 Ahg904629 pumilio 24
76.4199 Ahg483610
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression