Detail



ID : Ahg354188

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|354188|fgenesh1_pg.C_scaffold_7001361
Sequence
ATGTCGTCTT GCGTAAGCGG CGGAGCCGCC TATAGCTTTG AGTTAGAAAT GGTGAAATCG CCGCCGTCAC ACAACACTCC TTCACCGTCA TCTACAATCT CCGAGTCAAA CTCTCCTCCG TTCTCAATCT CCACGAGAAG GCCACGAACT CCACGGAAAC GTCCGAACCA AACATACGAC GAAGCTGCGG CTCTTCTCTC CACCGCTTGC CCAAAAATCT TCTCTTCCAA GAAAACAAAA ACTCAGATTT TCGGCAATAA CAAATCTCCT TTAAGTGCTT ACGACGAAGC TTCTCAGTTG CTTCTTCCGT ACGCATCCGT CGAGGAGAAC GATTTTCTGT TCAATCCCAC CATTCCAACG AAAGCAGAAC ACTTCTTAGA GCATAAGGAA GTCTGTTTTG ATGACTCGGA GGTGATTAGG ATTGGGATTT TCGAAGATTT CGACGCGGAA TCGATTTTGG ATGAAGAGAC TGAAGAAGGG ATCGACAGTT TTATGGGGAA TATTGAATCG AACCACGGAG ATTCTGGCAG AATCGGTCGA TTAGAGGAAA TTATGAAGAA TGCTTGGAAC GGAAGATTTC GTTTAGGGCT AGGTTTGAGG AGTTCTCTCC GAGAAAACGA TGACGAGAAC TGGTGGAAAT TTCCCACCGT GGAATTTGAT CAGATCTCGC CGAGAATTCA GACCACCGCC GCCGCAACTG ATGATGGTCA ATCCAATGTC CTCGATAGTA ATAATAATAA AACCATCGTG ACTGCGGAGG GAGGCAAGAG AAAGAAGAAG AAGAAGAAGA AAACGAAAGT GGCTCCGGCG GCGGCGGAAT TAGAAGTTCC GGACTCGAGT CCAAAGATGG AGCAGAGAGT GAGTCCGTTG TTGAAGCTCG ACTACGATGG GGTTTTAGAG GCTTGGTCAG GTAAGGAGTC ACCGTTCTCC CACGAGATTC TGGGTTCCGA CGCCGCCGGA GTCGATTTTC ATGCAAGGTT GGGTGAGATA GATTTGTTCG GAGAAAGTGG AATGAGAGAA GCAAGTGTGT TAAGGTATAA AGAGAAGCGA AGGAACCGAC TCTTCTCCAA AAGAATCCGA TATCAAGTTC GCAAACTCAA CGCTGATCAA CGCCCGCGTA TGAAGGGACG ATTTGTGAGA AGGCCCAACG CAAGGAATTT AAGTGGGCTA CGATTATAA 
Length1179
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6385320.. 6387004
Download Sequence
A.thaliana
AGI-codeAT4G25990.2
DescriptionCCT motif family protein
TAIR curator summarychloroplast import apparatus CIA2-like. CIA2 is a transcription factor which upregulates chloroplast translocon genes
Alias[CIL]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg932247
12 Ahg492992 Leucine-rich repeat (LRR) family protein
21.2132 Ahg473316 CTP synthase family protein
22.6495 Ahg949262 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
34.2053 Ahg482616 growth-regulating factor 3
34.8138 Ahg888283 growth-regulating factor 2
37.2156 Ahg926904 homeobox protein 33
38.5746 Ahg487746 phosphatidylinositol 4-OH kinase beta2
40.0749 Ahg490253 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
41.5211 Ahg474002 receptor for activated C kinase 1B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression