Detail



ID : Ahg327005

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327005|fgenesh1_pm.C_scaffold_6002225
Sequence
ATGATTAACT GTTCATGGAT TTTTGTTTGG CTCTTCGTTG TGTTGGTGCC ATTCTCAAAA CGGGCTTGGT TCAAGAACTT GGTTGCCTTA CTTTACAAAA CCTTCTCTAG AAAGGAGAAG AAGCTGACGT TTTTGTCGCT CCCTGATGAA ATCATCTTGA ACTGTTTAGC CCGCATATCG AGATCACACT ACCCGAAACT CTCCCTTGTC TCCAAGACCT TTCGCTCCCT TCTCATGTCC CATAAGCTCA ACGTGGAGCG ATTTCACCTT AAAACCACTG AAACTTTTTT TCATGTCTGC TTAAAGCTTC CTGATAGACC TAGTCCCTCC ATGTTCACCC TTTGGATAAA ACCTGGTCAA ATCCTAATGA ACCAACTCGA GAAGAAGGAG AGGTCTACCG GAGATACTCG GTTGGTACAA ATACCTTCGT CATATTATAA TAAAGTACCA CTTTATGTCA TTACTGTTGG TTCCGAATTG TACGGACTCA GCCAACGCAA TGATCCGTCC TCCAACATGT TGGTGCGTAA TAAGGAGTTT TTGTTTTGCC GTAATTCTCC CAACATGATT GTAGCTCGAG CTAAAGCCCG TGCAGTCGTC TTCTATGGGA AAATATATGT GATGGGAGGT TGCGCGGCTA ATGAATCCGC GAATTGGGGT GAGGTTTTTG ACCCAAAGAC TCAAATTTGG GAAGCTTTAC CTGACCCTGG CCCGGAGCTC CGCTTTTCTT CAATTAGAGG AATAGAGGTG ATCGAAGGAA AGCTTTACAT TAGAAGCAAC GAGGAAAAAG ACTCTGTTTA TGATCCAAAA GAAGGTAAAT GGGATGTTGC AAAAAAATCA CACCTGCAAT GTATGATAGG TTGTGGAATG ATTGAAATAG CTAACTATGG TGGTAAACTC TTAATCTTAT GGGACAAGAT TGGTCCTTCT CAAGAAAAAG ATATTTGGTG TGCCTTGATT GCGATTGAGA AACGTGATGG TATTGATGAA GTTTGGGGAA AAATTGAGTG GGCTAGTATT GTGCTTACGG TTCCGTGCTC ATACGTTTTC TTGTATAGTC TACTAAACAG GTGGTGA 
Length1077
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12830992.. 12832173
Download Sequence
A.thaliana
AGI-codeAT5G28180.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg496549 flavonol synthase 5
5.09902 Ahg947612
9.16515 Ahg892274 SGNH hydrolase-type esterase superfamily protein
11.1355 Ahg951906 MATE efflux family protein
15.0997 Ahg490879 cytochrome P450, family 81, subfamily F, polypeptide 4
15.5885 Ahg899865 flavonol synthase 5
18.1108 Ahg926802
18.303 Ahg949205 transposable element gene
19.5448 Ahg486813 Tetratricopeptide repeat (TPR)-like superfamily protein
29.2575 Ahg923447 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression