Detail


ID : Ahg923447

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923447|scaffold_104728.1
Sequence
TTTTTGTCTT CCTCTATCCA ATGGCTCTTT CTGTGCTCCT TTCTTCATCA CCTCTTCTTA CAAGTAAAGC CGATGAAAAG TATGCGAATG TAAAATGGGA CGAGCTGGGA TTCGCACTGG TTCCAACAGA TTATATGTAT GTGGCGAAAT GCAAACAAGG AGAGAGCTTT TCAAAAGGAG AGATTGTTCC TTATGGAGAT TTTTTAATAA GCCCTTGTGC TGGGATTCTC AATTATGGCC AGGGACTATT TGAAGGTCTC AAGGCTTATA GGACAGAAGA CGGACGGATC ACACTCTTCC GGCCTGACCA AAACGCTCTT CGTATGCAAA CAGGTGCGGA TAGGACTTGT ATGACACCTC CTTCTCTGGA CCAATTCGTC GAAGCAGTTA AGCAAACTGT GCTTGCCAAC AACAAATGGG TTCCTCCTCC GGGTAAAGGA GCTTTGTATA TTAGGCCTCT ACTCATAGGT ACTGGTGCTG TCCTTGGAGT CGCTTCAGCA CCTGAATATA CGTTCCTCAT TTACACATCT CCCGTAGGAA ATTACCACAA GGCAAGTTCA GGCTTGAACC TCATAGTTGA TCATAAGCAT CGCCGAGCCC ACTCTGGTGG AACAGGGGGT GTGAAAAGCT GCACAAACTA TTCTCCAGTT TTGAAATCGT TGATCGAAGC AAAGTCATCT GGTTTCTCTG ATGTCTTGTT CCTGGATGCG GCAACTGGCA AAAACATTGA AGAGGTTTCT ACTTGTAACA TCTTCATTCT AAAGGGAAAC ATTGTATCCA CTCCACCAAC TTCAGGAACC ATTTTACCAG GAATCACAAG GAAAAGCATA AGTGAGCTAG CTCGTGATAT TGGCTACCAG GTTCAAGAAC GCGATGTTTC TGTCGATGAG CTATTAGAGG CAGAAGAAGT TTTCTGCACT GGGACCGCAA TGGTCGTCAA AGCTGTTGAA ACCGTGACCC TCCATGACAA AAAGATAAAA TACAAGACAG GGGAAAAGGC ATTGTCTACG AAGCTTCACT TGATATTAAC TAATATTCAA ATGGGAGTTG TGGAAGATAA AAAGGGTTGG ATGGTGGTTG TTGAATAATT CGTTTCCTGA TGAAATAT
Length1108
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24888749.. 24890980
Download Sequence
A.thaliana
AGI-codeAT1G50090.1
DescriptionD-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
TAIR curator summary
Alias[AtBCAT7][BCAT7][branched-chain amino acid transaminase 7]
Gene coexpression
MR
MR Locus Description
26.0384 Ahg473918 alpha/beta-Hydrolases superfamily protein
27.6767 Ahg935131 TRAF-like family protein
27.7489 Ahg933896
28.1957 Ahg489981 F-box associated ubiquitination effector family protein
29.2575 Ahg327005 Galactose oxidase/kelch repeat superfamily protein
38.0526 Ahg924945 SCR-like 4
51.5752 Ahg473435 F-box and associated interaction domains-containing protein
52.4976 Ahg938811 TRAF-like superfamily protein
56.0357 Ahg935238
56.285 Ahg930033 Integrase-type DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression