Detail


ID : Ahg327725

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327725|fgenesh1_pm.C_scaffold_6002945
Sequence
ATGTCTTTGA CAATGGCTGA TGGTGTAGAA GCTCCAGGAG GAAGAAGTAA AAGACAAAAC AGCTTATTAA GAAAGCAACT TGCTTTAGCT GTAAGAAGTG TTCAATGGAG CTACGCAATC TTCTGGTCGT CTTCACTTAC TCAACCTGGG GTTGTGGAGT GGGGAGAAGG ATGTTACAAT GGTGATATGA AGAAGAGGAA GAAGAGTTAC GAATCTCATT ATAAATATGG TTTGCAGAGA AGCAAGCAGC TTCGGAAACT TTATTTGTCT ATGCTTGAAG GAGATAATGG TACTACTACT GTTAGTACTA CTCATGATGA TCACAATGAT GATGATGATG ATAATTGTCG TCACAGTACA AGTATGATGC TGTCACCAGA TGACCTCTCT GATGAAGAGT GGTACTATTT AGTCTCCATG TCCTATGTCT TCTCTCCTTC TCAATGTTTG CCTGGACGAG CTTCAGCGAC GGGTGAGACC ATATGGCTCT GCAACGCTCA ATACGCGGAG AACAAGCTCT TCTCTCGTTC TTTGTTAGCA AGAACTGTTG TGTGTTTCCC TTACTTGGGC GGTGTGATTG AGCTGGGCGT CACTGAATTG ATTTCGGAAG ATCATAGTCT GCTTCAACAC GTAAAATCTT GCTTGTTGGA AATATCTGCA CACCAAGACA ACGATGATGA GAAGAAAATG GGAATTAAGA TCATTGAAGA GAAGCATCAG ATTCCATTAG GTATTTCTGA TGAAGACTTA CATTACAAAA GAACCATTTC AACAGTACTC AACTACGCCG CGGATAGATC CAGTAAGAAC ATTCATCACC GTCAACCAAG TACGGTTTCT TCTGATTCTG GCTCAAGTTT CTTGCGGTGG AAGCAATGTG AGCAGCCAGA CTCGGGTTTT GTTCAGAAAA AACAGTCACA GAATGTTTTG CGGAAGATAT TGCATGATGT TCCATTGATG CACACAAAGA GGATGTTCCC AAGTCAGAAA TCTGGTCTGA ATCAAGATGA TCCTTCGGAT ACAAGAAAAG AGAACGAAAA GTTCAGTGTC CTTAGAACTA TGGTTCCCAC TGTCAACGAG GTTGATAAAG AATCGATACT GAATAACACA ATCAAGTACT TGCAAGAACT GGAGGCAAGA GTAGAAGAGC TAGAATCATG TATGGGATCA GTTAACTTCG TAGAAAGACA AAGAAAGACG CCGGAGAACC TTAACGACTC TGTGTTGATC GAAGAGACAT CAGGGAACTA CGATGATAGC ACGAAGATCG ATGGTAATTC AGGAGAAACC GAACAAGTCA CTGTTTCCAG AGATAAGACA CATTTGAGAG TTAAACTCAA AGAAACAGAA GTTGTGATCG AAGTAAGATG TTCTTACAGA GACTACATAG TTGCAGACAT CATGGAAACT CTGAGCAATC TTCACATGGA TGCTTTCTCT GTTCGATCTC ACACACTTAA TAAGTTCCTC ACATTGAATC TCAAGGCCAA GTTTCGTGGG GCTGCAGTTG CGTCCGTAGG AATGATCAAG CGAGAGCTGA GAAGAATCAT TGGTGATTTG TTTTAA
Length1566
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23257359.. 23260048
Download Sequence
A.thaliana
AGI-codeAT4G00480.2
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summaryMYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus
Alias[ATMYC1][myc1]
Gene coexpression
MR
MR Locus Description
14.6969 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
31.1127 Ahg487523 Eukaryotic aspartyl protease family protein
31.9687 Ahg931385
41.5331 Ahg478179 lipid transfer protein 6
44.0908 Ahg330654 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
44.441 Ahg494701 Leucine-rich repeat protein kinase family protein
44.8999 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
45.3431 Ahg948089 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
49.3153 Ahg927503 Leucine-rich repeat (LRR) family protein
54.4977 Ahg318143 Disease resistance-responsive (dirigent-like protein) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression