Detail



ID : Ahg494701

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494701|fgenesh2_kg.8__517__AT5G43020.1
Sequence
ATGCTTCTTC GTTGTAACTT ACCCATTTCT GGGTTTCTTC TCTTCTGCTT CTTCTTCACC ATTGTTGCTT CTTCTTCTTC TTCCTTAAAC CGCACTAAAC ACGTGTTTCA TTACCACCGT GACGTTTCTG CTTTGTTACG TTTCAAATCC AAAGCTGATT TATGGAACAA GATTAACACG AGCTCTCACT TTTGTCAATG GTGGGGTGTT ACGTGTTATG GAAACAGAGT TGTTCGTTTG GTTATTGAAG ATCTTTATCT CGGAGGTCGA CTCGTTCCTG ACTCAGTTAA TAAACTCGAC CAGCTTCGAG TTCTCAGTCT CAAAAACACT TCCTTAACCG GACCTATACC AGATTTCTCC GGTTTGGTTA ATCTCAAATC GTTATTTCTC GATCACAACT CTTTTTCCGG TTCGTTTCCT CTCTCGGTTC TCGCGCTTCA CCGGTTAAGA ACTCTTGATT TCTCCTTTAA CAACCTCACC GGTCCAATCC CTCCCGGTTT AGTTCTCTCC GACCGGTTGA TTTATCTCCG TCTCGATTCG AACCGGTTTA ACGGTCCCGT CCCTGCTCTA AACCAATCCT CGCTTCATAC ATTCAATGCT TCGGTTAACA ACTTAACCGG TGCTGTACCG GTAACAACAG TTCTGTTACG ATTCGGTATT TCTTCATTTC TCAAAAACCC TAATCTCTGC GGCGAGATCG TTCACAAAGA ATGCAATCCA AGACCCAAAT TCTTCACTCC GGTAACGGCG GCGCCGCCAC CGAAGATGGT TCTCGGTCAA ATCGCGCAAA TCGAAGGAGC AAGATTATCC CGGCCAAATC AAAACAAACA TTCACGGTTC TTTGTGATTC TCGGTTTTAT CTCCGGCGCT TTTATCCTAT TCATCTCCGT CGCGTGCCTA ATCGGCGCAG TGAAGAGACG AAGAAGCAAA AACAAGAAAC AAAAGGGGAA AGAATCAACT GCAGTAGTCA CATTCGACGC GGCGGAGACG GCGGAAGTAG CGGCGGCGAT AGAACAAGAG AGTGAGATAG AAGAGAAAGT GAAGAAGCTA CAAGCGACAA AAAGTGGGAG TTTAGTATTC TGTGCGGGTG AGGCACACGT TTATACGATG GACCAACTAA TGACAGCATC AGCTGAGTTA TTAGGTAGAG GAACAGTGGG GACCACTTAT AAAGCATTGC TTGATAGCCG TTTGATCGTC ACTGTAAAGA GATTAGATGC CATTAGATTA GCGGGTGTAG GGAGAGAGAA ATTTGAGCGT CACATGGAAT CAGTTGGTGC TTTAGGGCAT CCGAATTTGG TACCACTCAG AGCTTATTTT CAGGCCAAGG AAGAGAGGTT ATTGATTTAT GATTATTTGC CAAATGGCAG TCTCTCGTCT CTTGTCCATG GTACAAAATC GTCGAGGGCA ACGCCATTGC ATTGGACATC ATGCTTGAAG ATAGCAGAAG ATGTGGCTCA GGGTCTCTCT TACATCCACC AAGCGTGGCA GCTTGTTCAT GGCAATCTCA AATCCTCTAA TGTCCTTCTC GGACCAGACT TCGAAGCTTG TATTGCCGAT TACTGTCTCG TTGCTCTTGC AACAAACCCT CCTCTAACAT CTAATGACGG TCAAGAAGAC GCGGATGCAG CGGCTTATAA AGCCCCTGAA GCTCGACACA AGAGTGTAGA TTATCAATCT GTTAAAGCTG ATGTATATTC TTTTGGGATT CTTCTCTTGG AGCTTTTGAC AGGGAAGCAA CCTTCGAAGA TTCCGGTTTT ACCGTTGGAT GAGATGATTG AATGGGTGAG GAAAGTGAGA GAGGAAGGTG AGAAGAAGAA TGGGAATTGG CGAGAGGATA GAGATAAATT CGGAATGTTG ACTGAAGTTG CGGTAGCTTG TAGCTTAACA TCGCCCGAAC AGAGACCAAC GATGTGGCAA GTGTTGAAAA TGTTGCAGGA GATTAAAGAA GCGGCTGTGA TGGAAGAGTG TGAACTTGTT ATGGATTCTT CCAATTCTGA AAGCTCCTAA TTAAGGACAG TAATTTTATT TTTTCTCAAC TAAATCTCTC TTTCATGTCT CTTTCACTAA TCTTAAAACT 
Length2080
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4652138.. 4654989
Download Sequence
A.thaliana
AGI-codeAT5G43020.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg927503 Leucine-rich repeat (LRR) family protein
4.24264 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
8.24621 Ahg918929 cellulose synthase-like D5
8.66025 Ahg926666 Glucose-methanol-choline (GMC) oxidoreductase family protein
8.66025 Ahg945124 glycine-rich protein
8.83176 Ahg477690 Li-tolerant lipase 1
9.38083 Ahg920334 homeobox protein 31
9.79796 Ahg482818 glycerol-3-phosphate acyltransferase 6
10.4881 Ahg317406 Actin-binding FH2 (formin homology 2) family protein
10.7238 Ahg477440 serine carboxypeptidase-like 25
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression