Detail



ID : Ahg328030

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328030|fgenesh1_pm.C_scaffold_7000257
Sequence
ATGGCTTCGT CACCACTTAT CGCAACGTCA CTACCGCAGA ATCACGCCAC CGCAACCGCC AGCTTCCGCA ATCCGCCGCC TGAGAAACTT GCAGTTTTAA TCGACGATTC GCATTCAGTG GATGAAGTGC TCCAAATCCA CGCAGCTATT CTCCGTCATA ATCTCCTCAT CCACCCTCGT TACCCAGTTC TTAACCTCAA GCTCCACCGT GCATACGCTT CCCACGGCAA AATTCGCCAC TCGTTGGCCT TATTTCACCA GACGATCGAT CCAGACTTGT TCCTCTTCAC CGCCGCGATC AACACTGCCT CCATTAACGG CCTCAAAGAT CAAGCTTTCC TGCTTTATGT TCAATTGCTT TCTTCTCAAA TCAACCCCAA TGAGTTTACT TTCTCGTCGA TTTTGAAATC TTGCTCAACT AAGTCCGGAA AATTGATCCA TACCCATGTT CTTAAATTCG GATTGGGGCT TGATCCGTAT GTGGCAACTG GTCTCGTCGA CATTTATGCG AAAGGAGGAG ATGTGGTATC TGCCCAGAAG GTGTTCGATA GAATGCCTGA GAGAAGTCTC GTTTCTTCTA CAGCTATGAT CACTTGCTAT GCAAAGCAGG GGAACGTTGA GGCTGCGAGA GCTTTGTTCG ATAGAATGTG TGAGAGAGAC ATTGTTTCTT GGAACGTGAT GATTGATGGA TACTCTCAAC ATGGGTTCCC TAGTGACGCT CTGATGCTTT TTCAGAAACT TTTGGCGGAT GGTAAACCGA AACCTGATGA AATAACCGTT GTAGCTGCTC TTTCAGCTTG TTCGCAGATT GGAGCGCTTG AAACTGGGCG ATGGATCCAT GTTTTTGTCA ATAGCAGTCG CATTAGGCTC AATGTTAAAG TGTGTACGGC TCTGATTGAT ATGTATAGCA AATGTGGGAG CTTGGAAGAG GCAGTTTTAG TGTTTAACGA TACTCCTAGG AAGGATATCG TTGCGTGGAA TGCGATGATT ACTGGTTACG CAATGCACGG TTATAGCCAA GACGCGTTGA GATTGTTTGA TGAGATGCAG GGGATCACAG GGTTGCAACC AACAGATATA ACTTTCATAG GAACACTTCA GGCTTGTGCT CATGCTGGTT TGGTAAACGA AGGGATACAA ATCTTTGAGT CAATGGGGCA AGAGTATGGG ATTAAATCCA AGATCGAGCA TTATGGATGC TTAGTTAGTC TGCTCGGTCG TGCTGGCCAG TTAAAACGGG CTTACGAAAT CATAAAAAAC ATGAACATGG AGGCTGATTC TGTCTTATGG AGTTCTGTTC TCGGAAGCTG TAAACTTCAT GGAGAATTTA TGTTAGGCAA GGAAATTGCA GAGTATCTTA TTGGACAAAA CATCTCAAAC TCAGGAATTT ATGTTCTTCT TTCGAACATA TATGCATTGG TGGCTGATTA TGAAGGTGTT GCAAAAGTGA GGAACTTGAT GAAGGAGAAA GGAATAGTGA AGGAGCCCGG TATAAGCACC ATAGAAATTG AAAACAAAGT TCATGAATTC CGAGCTGGAG ATAGAGAACA CTTGAAAAGC AAAGAAATTT ACACAATGCT AAGAAAGATC AGTGAGCGGA TCAAGTCTCA CGGTTATGTT CCAAATACAA ACACAGTCTT GCATGATCTG GAAGAGACAG AGAAAGAGCA ATCTCTACAA GTTCACAGCG AGAGACTCGC GATTGCATAC GGTCTAATCA GTACCAAACC GGGAAGTCCC TTGAAAATAT TCAAGAACCT ACGAGTGTGT TCGGATTGTC ATACGGTGAC AAAACTGATA TCGAAAATCA CAGGACGGAA AATCGTCATG AGAGATCGGA ATAGGTTCCA TCATTTCTCA GATGGCTCTT GCTCTTGTGA CGATTTCTGG TAA 
Length1893
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1279270.. 1281169
Download Sequence
A.thaliana
AGI-codeAT4G37380.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.3623 Ahg483133 Rhodanese/Cell cycle control phosphatase superfamily protein
18.5742 Ahg473107 Apoptosis inhibitory protein 5 (API5)
20.4939 Ahg923882 Pentatricopeptide repeat (PPR) superfamily protein
20.9045 Ahg899275 Pentatricopeptide repeat (PPR) superfamily protein
24 Ahg480422 Pentatricopeptide repeat (PPR) superfamily protein
31.4325 Ahg488722
35.5528 Ahg470958 Ribosomal L18p/L5e family protein
39.4208 Ahg893389 Alg9-like mannosyltransferase family
43.566 Ahg478367 FAD-dependent oxidoreductase family protein
51.8459 Ahg485697 Thioredoxin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression