Detail



ID : Ahg328954

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328954|fgenesh1_pm.C_scaffold_7001181
Sequence
ATGGATAGTC AAGAGGTTTC TATGGATGTT GAAGCCCCGA TCGAGAAGAC CAACGATGAT CGATCCCTTC CTTTTTCAAT TTTTAAAAAG GCTAATACTC CTGTTACCTT AAAGCAGTTT GAGAACCTTG TGTACACGGT GAAGCTGAAG GAACCACAAG GCTGGTTCCG AAAGAATGAC AAAACCGAGG AGCGAACCAT CTTGAAGGGC TTAACAGGGA TCGTCAAACC TGGGGAGATC CTGGCTATGC TCGGTCCCTC CGGGAGCGGT AAGACCAGCT TGTTGACGGC TCTCGGAGGA CGGGTAGGGG AAGGGAAAGG GAAGCTCACT GGGAACATAT CTTACAACAA CAAGCCATTA TCCAAAGCTG TGAAGCGAAG GACCGGTTTC GTGACTCAAG ATGATGCTCT TTACCCTAAC TTGACTGTTA CAGAAACTCT AGTCTTCACC GCGCTTCTTC GGCTTCCTAA TTCTTTTAAA CAACAAGAGA AGATCAAACA AGCTAAGGTA GTCATGACTG AATTGGGTCT AGACAGATGT AAGGACACTA TCATTGGAGG ACCCTTCTTG AGAGGTGTTT CCGGTGGTGA GAGGAAAAGA GTTAGTATAG GGCAAGAGAT TCTTATAAAC CCTAGTTTGC TTTTTCTTGA TGAGCCTACT TCTGGTCTTG ATTCTACCAC TGCTCAAAGG ATCGTGTCGA TTTTGTGGGA ACTGGCTCGT GGTGGAAGAA CGGTCGTGAC CACAATTCAT CAACCTTCTA GTAGGTTGTT CTATATGTTT GATAAGCTTC TGCTCCTTTC AGAAGGTAAT CCGATCTACT TCGGGCTTGG ATCCAGTGCT ATGGATTATT TTGCTAGAGT TGGATGCTCC CCCTCAGTTG AAAGGATTAA TCCCTCGGAT TTTCTCTTGG ACATCGCAAA CGGTGTTGGA TCAGATGAAT CCCAAAGACC AGAGGCTATG AAAGCAGCTC TAGTTGCGTT TTACAAGACA AACCTGTTGG ACAATGTTAT CAATGAGGTT AAAGGACAAG ATGATCTATG TAACAAACCA ATAGAGAGTC CTCGTGGAGC GACCAATACT AATGGAGAGT GGCCAACGAC GTGGTGGCAG CAGTTTTGTG TTCTTTTGAA GAGAGGCCTT AAGCAAAGGC GTCACGATTC TTTCTCTGGC ATGAAAGTTG CTCAGATATT CCTCGTCTCT ATCCTCTGTG GTCTTCTTTG GTGGCAAACG AAAATTTCTC GTTTACAAGA TCAGATAGGG CTGTTGTTCT TTATATCATC CTTCTGGGCA TTTTTCCCTC TCTTCCAACA AATCTTCACA TTTCCTCAAG AGCGAGCAAT GCTCCAGAAA GAACGTTCCT CGGGCGTGTA CAGGCTCTCG CCTTACTTCA TGTCCCGATT AGTCGGGGAT CTACCAATGG AGCTTATTTT ACCAACTTGT TTTCTTGTCA TCACATATTG GATGGCCGGT CTAAACCATA ACCTCGCAAA CTTTTTTGTG ACCCTTTTGG TACTCCTCGT CCATGTCCTT GTCTCCGGTG GGCTAGGACT AGCCCTAGGC GCCCTAGTTA TGGACCAGAA GACAGCCACG ACACTCGGGT CAGTCATAAT GCTCACATTT TTGTTAGCAG GAGGATACTA CGTTCAACAT GTCCCAGTGT TCATCTCTTG GATTAAATAC GTATCAATAG GTTACTATAC CTATAAACTA CTGATATTAG GTCAGTACAC GGCGAATGAG TGGTATCCAT GTGGCGAAAA TGGGATATTG AGGTGTCATG TTGGTGACTT TGAAGGTATC AAGCATATAG GATTTAATAG TGGATTGGTC TCTGCCTTAG CTTTGACTGC GATGCTTGTT GTTTATAGAG TTATTGCTTA TATCGCTTTG ACGAGGATTG GTAAGACCAA ATCTGGCTGA 
Length1920
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5792282.. 5794624
Download Sequence
A.thaliana
AGI-codeAT4G27420.1
DescriptionABC-2 type transporter family protein
TAIR curator summary
Alias[ABCG9][ATP-binding cassette G9]
Gene coexpression
MR
MR Locus Description
10.8628 Ahg478121 Pectin lyase-like superfamily protein
22.9783 Ahg947825
25.219 Ahg942130 Leucine-rich repeat (LRR) family protein
27.7128 Ahg356437 Protein of unknown function (DUF1264)
30.1993 Ahg915758 Small nuclear ribonucleoprotein family protein
33.541 Ahg319761
45.6727 Ahg479659 Mannose-binding lectin superfamily protein
45.793 Ahg931060
46.5081 Ahg470978 plant glycogenin-like starch initiation protein 5
47.8017 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression