Detail



ID : Ahg478121

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478121|fgenesh2_kg.3__822__AT3G07830.1
Sequence
AATGGGTTCA TATTTCGGAA TTTCTACAAT TTTCGTAATA TGTTTGCTGG GATTTTCAGC CAATGCTGAG GTGTTTAGAA TTGGTTCTTC TCCAGGTTCT GATATTACGC AGGCACTTCT GAGAGCATTC ACATCAGCAT GCCAAGCTCC GACACCGAGC AAGGTGGTGA TCCCAAAAGG ACAGTTCAGG CTTGGTGAGA TCATGATGAC GGGTCCATGC AAATCTCCAG TGGAGATAAC CCTGCAAGGC ACTGTCCTTG CTGACGGAAA CTCGATCCAT GGAAAGGAAA AATGGGTCGT GTTCCAAAGA ATGGATGGGT TTAGGTTGAA CGGAGGTGGA ACTTTCGACG GTGAAGGTAA CGCAGCTTGG AGGGTCAATA ACTGTCACAA GACTTTCGAG TGCAAGAAAC TTCCCATCGT AAGCATAAGG TTTGATTTCG TGACGAACGC TGAGATCAGA GACATATCCT CAATCGATGC CAAGAACTTT CACATCAACG TGATAGGCGC CAAGAACATG ACCTTTAACA ACGTCAAGAT CATGGCTCCA GCAGAGAGCC CCAACACTGA CGGGATCCAC TTGGGAAGAA GTGTCGGGGT CTCGATTATC AACTCTAGGA TCGCCACCGG AGATGACTGT GTCTCCGTCG GGGACGGGAT GGTGAATCTT CTCGTGAAGA ACGTCGTGTG TGGTCCTGGA CACGGGATCA GTGTGGGAAG CCTTGGAAGG TACGGACACG AGCAGGACGT CAGCGGCATT AGGGTCATCA ACTGCACCCT CCAGGAGACT GACAACGGCC TCAGGATCAA GACTTGGCCC TCTGCAGCTT GTTCCACCAC TGCCTCCAAT ATTCATTTTG AGAATATCAT CCTTAGAAAC GTTAGTAACC CAATCCTCAT CGACCAAGAG TACTGTCCCT GGAACCAGTG CAACAAGCAG AAATCATCAT CCATTAAGCT GGCAAACATA AGCTTCAAGA GGATTAGAGG GACATCAGGG AACAAGGACG CAGTGAAGCT GTTGTGCAGC AAGGGATATC CGTGTGAGAA CGTTCAGGTT GGAGACATTA ATATTCAGTA CACTGGAGCC GATGGTCCAG CCACCTTCAT GTGCTCAAAC GTAAGGCCTA AGCTTGTTGG AACTCAGTTC CCAAAGGCTT GTAACACACC ACCCGTGTTG ACCCAACCTA AGTAAAATGT AGAAAGCTCA CAACAATATT TAGGAATTTC TCATCCAATT TTTCTTCAAT CTTAGATTTT TTCCCAAAGT CACACAAGGG AGATTTAATT TAAAAAGCTG TAAAAGAATT TTGTTTCACT TTTTTTTTTT TTTATTTGAT GCCAACACAT ATACATAGAT GTGTGTGTGC ATATATGAAT GCAATAAAAC CAAAAAGATA CAGGTTAATT T 
Length1411
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3082558.. 3084253
Download Sequence
A.thaliana
AGI-codeAT3G07830.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias[PGA3][polygalacturonase 3]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg931324
5 Ahg486550 Protein of unknown function (DUF1442)
5.83095 Ahg358371 Pectin lyase-like superfamily protein
10.8628 Ahg328954 ABC-2 type transporter family protein
11.4018 Ahg890702
15.3948 Ahg348900 Domain of unknown function (DUF26)
15.4919 Ahg907708
15.8745 Ahg917658 subtilase 4.13
17.4929 Ahg897957
19.6977 Ahg314476 mRNA capping enzyme family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression