Detail



ID : Ahg330181

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330181|fgenesh1_pm.C_scaffold_7002408
Sequence
ATGGTTCAAT GTGCCGATTG TAAGAAATGG AGGCTCATAC CTTCGATGCA ACACTACAAA ACAATCAAAG AAACACAACT TCAAACCCCC TTTGTCTGCG AGAGAGCATG TGCTTGGACG CCAAACATGT CTTGTAATGT TCCTCAAGAT GGAACAACAT GTGATACATG GTCTAACATC CCTCCCATAC CCACCGGCTG GTCACGCTCG GTGTATATTA GAAGTGATTC CACAAAATTT GCAGACGTAT ATTATTTTCC TCCATCAGGA GAGAGGCTAC GATCATCAGC TGATGTCCGA AGTTTCTTGG ACAACCACCC AGAATATGTG AGAGCAGGGG TGAATCCTTC TCAGTTCTCA TTTCAGTTGC CGAAACCCCT GGACGAGAAC TATGTGAAGA AGCGCACTCG ACCAGTGAAA CCAACAAAAT CGTCAAAGGA TAACAATTGT AAAAAGGACA AAAAATGA 
Length468
Protein Sequence
Protein Residue
Map Locationscaffold_7: 17163657.. 17164443
Download Sequence
A.thaliana
AGI-codeAT5G35338.2
Descriptionmethyl-CPG-binding domain 12
TAIR curator summaryProtein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
Alias[MBD12][methyl-CPG-binding domain 12]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg474556
3.4641 Ahg931265 Plant invertase/pectin methylesterase inhibitor superfamily protein
4.69042 Virus0558
5.47723 Ahg356670 prohibitin 7
5.74456 Ahg331298 transposable element gene
6.32456 Ahg931062
6.63325 Ahg929729 iaa-leucine resistant 2
6.78233 Ahg952202 succinate dehydrogenase 2-3
7.74597 Ahg315984
8.12404 Ahg494287 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression