Detail



ID : Ahg952202

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952202|scaffold_45500003.1
Sequence
CTGTCTTTGG AATTGAAGAG CAATGGAGCC ATGGTTAAAG ACGAGGAAGC CTCCAAAAGA CGGACGTGAA CACCGGCAAT CACCAAAAGA CCGGAAGAAA CTAGACGGGC TATACGAATG CATATTGTGC GCGTGTTGTA CCACATCATG TCCTTCTTAT TGGTGGAACC CTGAGGAGTT TCCAGGACCC GCGGCTTTAC TACAAGCGTA TCGTTGGATC AGTGATAGCC GTGATGAGTT TGGAGAAGAG AGACTTCAGG CGATAACTGA GAATCAAACC AAAGTATATA GATGCAGAGC AATCAAGAAC TGTACGGCCA CTTGTCCTAA AGGACTTAAT CCAGCTAGTG CTATTTTGAA AATGAAGTCT AAGCATTTTC TCTCCGATCC GGTTGTGAGA ACCGAGAGTC TCTAGCCTGA ACATGACTCG GACCG 
Length435
Protein Sequence
Protein Residue
Map Locationscaffold_455: 6102.. 6611
Download Sequence
A.thaliana
AGI-codeAT5G65165.1
Descriptionsuccinate dehydrogenase 2-3
TAIR curator summaryOne of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Transcripts appear during seed maturation, persist through dessication, are abundant in dry seeds, and markedly decline during germination.
Alias[SDH2-3][succinate dehydrogenase 2-3]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg330181 methyl-CPG-binding domain 12
7.34847 Ahg939352
8.12404 Ahg946739 Thioredoxin superfamily protein
9.38083 Ahg936814
9.38083 Ahg936795
19.1833 Ahg484573 Gamma-thionin family protein
19.8997 Ahg938032 PIF1 helicase
23.3024 Ahg900076
24.2487 Ahg939564 Protein of unknown function (DUF674)
24.2899 Ahg913195
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression