Detail



ID : Ahg330506

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330506|fgenesh1_pm.C_scaffold_7002733
Sequence
ATGTCTCAGT CACTGGTTCG AGCAATCTCA GCTCGGAAGA ATCAATTCAG TCTTAAGTTT TACTATAGAT GTGTTTATTC TAAGCAATTT CATTCCCAAG ATCAGATCAT TGCTCCTAAT TGCTTCAATT TTTCATCTTT AGGATTTACT TCAAGTGTTA GACATGGAAG TCATCAGAAT AGTTATAGGT TTTGTGGTAA TTTGATCCCA GACTTGAATC TTGCTTGCTT AGTTCGACCC TCAAATGGAT TTGCCACGGT TTCTGATGAA TCAAATGTTG ACAATGGTGA GAAACTTGTG GATAAGAAGC CAAAGGTTGT TTACAAGAAA CCAATTGATT TCACCAAAAT AGATGCCAAT TTACTACCTA CGGTGATGCT TATGGGTCGG CCAAATGTTG GGAAGTCTGC TTTGTATAAC CGGAGGGAGG CTCTTGTTTA CAATACTCCG GATGATCATG TGACAAGGGA TATAAGAGAA GGGATTGCCA AGTTAGGTGA TTTGAGGTTC AATGTGTTGG ACTCTGCTGG TATAGAGACT GAGGTTTCTT CGGGTACTAT TCTGGGTAGA ACTACAGCAA TGACGGCTAA TGTGCTTGCA AGGACTCAGT TTGCGGTTCT TATTATTGAC GTGCGGGCTG GGTTGCATCC ATTAGATTTA GAGGTTGGGA AATGGTTGAG AAAGCATGCT CCTCAGATTA AACCCATTGT AGTTATGAAT AAATCTGAAT CAATTGGCTC TCTTGATGAA GTTGCTTCTG AGGCCCTTGC ACTAGGTTTT GGAGAACCTA TTGCTATTTC CGCCGAGACT GGACTTGGGA TGACCACACT TTATGAAGTT CTCCGCCCTC TACTAGAGGA TTACATGGTC GAAATGTTAA ATGATATATG CAGTCAAAAT GATGTTCTGA GCGATGAGAA TCTCTCTGAT GAAATCGACG AGTCCAAGTT GCCATTGCAG TTAGCTATCG TAGGTAAGCC TAATGTTGGG AAGTCAACAT TGCTCAATGC ATTGTTGGAA GAAGAGCGTG TGTTGGTGGG TCCAGAAGCT GGTCTCACCA GAGATGCTGT GAGAGTTCAG TTTGAGTTTC AGGGTAGGAC CGTTTATCTG GTTGATACTG CTGGGTGGTT GGAGAGAACA GAGCGAGACA AAGGACCAGC ATCTTTGAGT ATCATGCAAT CAAGAAAGAG TCTTATGCGG GCACATGTTA TCGCGTTAGT TCTCGATGCT GAAGAGATCA TAAAAGCTAA ATGTAGTATG ACACACTCAG AAGTAGTTAT AGCTAGACGT GCTGTAGAAG AAGGACGTGG TCTAGTCGTT ATTGTTAACA AAATGGATCG TCTAAGAGGT AGAGAGAACT CTGAGATGTA CAAGAAGATC AAAGAAGCTG TTCCCATTGA AATTCAGACA GTTATTCCTC AGATAACGGG AATACCAGTA GTGTTTATCT CTGCATTAGA GGGAAGAGGA CGTATGGAAG TAATGAAAGA AGTCACTGAC ACATACAAGA GATGGTGTTC AAGACTTTCC ACAGGCCGCC TCAATCGCTG GTTGCGTAAG GTTATGAGCC GACATTCTTG GAAAGACACG GCTTCACAGC CAAAGATCAA GTTTTTCACT CAAGTGAAAG CTCGACCACC GACTTTTGTA GCGTTTGTGA GCGGTAAAAT GCAGTTATTG GAAAGCGACA TAAGGTTTTT GACTAGATCA TTGAAGGAAG ATTTTGATTT AGGCGGGACT CCAATTCGAA TCATACAGCG GGTTGTTCCT CGAGCACCAC CCTCTGGTAC AGGCGGTGGT GGAAGCGGAA ACAGCTCGAA GAGTCGAGTA GTGCATAGAA CCACCTCAGA CAAACGGACT CTCTCGGCCT AA 
Length1872
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21417494.. 21420118
Download Sequence
A.thaliana
AGI-codeAT5G39960.1
DescriptionGTP binding;GTP binding
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
3.31662 Ahg318838 RNA-binding (RRM/RBD/RNP motifs) family protein
9.8995 Ahg495573 DEA(D/H)-box RNA helicase family protein
12 Ahg496675 Transducin/WD40 repeat-like superfamily protein
12.8062 Ahg318651
13.6015 Ahg487244 biotin F
14.8324 Ahg485301 Transcription factor IIIC, subunit 5
15.748 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
16.5227 Ahg908084 Zinc finger (C3HC4-type RING finger) family protein
18.1659 Ahg493918
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression