Detail



ID : Ahg330565

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330565|fgenesh1_pm.C_scaffold_7002792
Sequence
ATGAAACTCT TAGGAAAAAT GATATATGTA GAATGTTTTA TGATAATAAT GGCGACATGG TTCGTGTCCA TGAGTTATGG TCATCGAGCG ATGATGGTTA GTGATGTAGC CGAAGCACCC GTGATTGACG ATGTAGTAGG AAGCCCAACC AACGGACTCG ACACTTCTTG GTATGACGCA CGAGCAACAT TTTACGGTGA TATCCATGGT GGAGAAACTC AACAGGGAGC TTGTGGATAC GGTGATTTAT TCAGACAAGG CTATGGTCTA GCCACATCGG CATTGAGCAC AGCACTCTTC AATGAAGGGT ACACATGTGG GGCTTGTTAC GAGATCATGT GTGCGAACAA TCCACAATGG TGTTTGCCCG GATCCATTAA GATCACTGCT ACAAATTTCT GTCCACCAAA TTACACCAAA ACCGTCGGCG TTTGGTGCAA CCCACCCCAA AAGCATTTTG ATCTCTCCTT ACCAATGTTC CTCAAGATCG CCCAGTACAA AGCTGGGGTT GTTCCAGTTA GATACAGACG TGTTGCTTGT GCAAAAACTG GTGGTGTCAA GTTTGAAACC AAAGGAAACC CTTATTTCTT AATGATATTG CCATACAATG TAGGAGGAGC TGGAGATATT AAGTTCGTGC AAGTTAAAGG AAACAAAACC GGGTGGATAA CAATGAAAAA GAATTGGGGA CAGAATTGGA CCACTGGTGT TAAGTTAACG GGTCAGGGTA TATCGTTAAG GGTTACAACG AGTGATGGGA TTACAAAAGA TTTTATTAAT TTGATGCCAA AAAATTGGGG ATTTGGACAG ACTTTTGATG GAAAGATTAA TTTTTAG 
Length837
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21925332.. 21926413
Download Sequence
A.thaliana
AGI-codeAT5G39300.1
Descriptionexpansin A25
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP25][ATEXPA25][ATHEXP ALPHA 1.18][EXP25][EXPA25][expansin A25][EXPANSIN 25]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg892520
15.4919 Ahg925305
32.4654 Ahg924765 PA-domain containing subtilase family protein
45.3211 Ahg494323 P-glycoprotein 7
47.2335 Ahg942998
47.655 Ahg479712 Domain of unknown function (DUF26)
58.5833 Ahg479962 Defensin-like (DEFL) family protein
62.1128 Ahg489255 HXXXD-type acyl-transferase family protein
62.498 Ahg476489 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
81.388 Ahg909475
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression