Detail



ID : Ahg331392

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331392|fgenesh1_pm.C_scaffold_8000735
Sequence
ATGTTTGAGG AAAAGATCAT AACTATTGGT GAAGATGTAA AATCTTTCAA CTCTTCTGAT CATAAAGTTG ATCCAGCAGT ACCTGCATCT TTGACATGGC AAAGAAAGAT AGACAGTGAC GGAAAGCCTC CCCGGGAATT CAATCTGACT GCTAAAGAGA TTTTTCAGCT GGCTCCTGTT GGCATTCGGT TATGGTTTCT TTGCAGAGAA GAAGCTGCTA AAGGAAGGTT GGCCTTCATA GATCCATTCT CTAGGCACTC TGTAACGTCT TCCCATGGTG TTCCACTTGG GGGTATTGGT GCTGGTAGCA TAGGAAGGAG TTTTCAAGGT GAATTCCAGC GATGGCAGCT ATTCCCTCCA AAATGTGAAT ATGAACCTGT TCTAGCAAAT CAATTCTCAG CGTTTGTTTC ACGCGCCAAT GGTAAAAAGT ACTCGACGGT GTTATGTCCT AGGAATCCAA AGATGGGAAA ACAAGATTCG GAATCAGGAA TTGGTTCTTG GGACTGGAAT CTGAAAGGAG ACAAGTCTAC ATATCATGCT TTATATCCGA GGTCTTGGAC AATGTATGAG GGTGAACCTG ATCCAGAGCT TAGGATCATT TGTCGTCAAG TTTCACCCTT TATACCTCAC AACTACAAAG AGAGCAGCTT TCCTGTGTCT GTTTTCACTT TCACACTTCA TAATCTCGGA AACACTACTG CGAATGTGAC ATTGCTCTTC ACTTGGGCGA ATTCTGTTGG AGGAGACTCA GAGTTCTCAG GTGGCCACTA CAACTCCAAA ATAATGATGA ATGATGGAGT CCAGGGTGTG CTCTTACATC ATAAAACCGC AAATGGGTTA CCATCATTGT CATATGCGAT TTCAGCTCAG GCGACCGATG GTGTTAGTGT CTCAGCCTGC CCATTTTTCA TAATATCTGG AAAGCAGAAC GGAATCACAG CAAAAGATAT GTGGCAAGCT GTCAAAGAGA ATGGTTCTTT TGATCACTTC AAAGCTTCTG AGGCGTCAAT GCAGTCAGAG AACGGGTCAT CGATTGGGGC AGCAGTAGCA GCTTCTTTAA CAGTCCTACC AGGAGAGTCA CGCATTGTCA CATTTTCTCT GGCTTGGGAC TGTCCTGAAG TGCAGTTTCC TAGTGGTAAA ATATATTCTA GGCGTTACAC AAAGTTTTAT GGCAATCATG GTGATGCTGC AGCACAAATT GCATATGATG CTATTCTTGG ACATAGTCAG TGGGAGTCCT GGATAGAAGA TTGGCAAAGA CCAATACTTG AAGACAAAAG ACTTCCTGCA TGGTACCCTG TCACTCTCTT CAACGAGCTT TATTACCTTA ATTCAGGAGG AACTCTTTGG ACAGATGGAT CATCACCAGT ACATAGCTTG GCAGGAGTCA GAGAAAAGAA GTTCTCACTT GATAAATCCC AACTCGGTCT GAATAATGAT ATCGAGGTAC CACATCAGAA TGATACAGCT ATCTCTGTCC TTGGAAAGAT GGCTTCTACA CTTGAGCAAC TTCATGCATC AACAGCATCA AACTCTGCAT TTGGTACAAA GTTACTTGAA GAAGGAGAAG AGAACATTGG ACACTTCCTT TACTTAGAAG GCATTGAATA TCGTATGTGG AACACTTATG ATGTTCATTT CTATGCATCT TTTGCACTGG TGATGCTGTT TCCAAAACTG GAACTTAGTA TCCAGAGAGA CTTTGCTGCT GCGGTGATGC TACACGATCC CACTAAAGTG AAGACGCTTA GCGAGGGACA ATGGGTTCAA AGGAAGGTTC TTGGTGCAGT TCCTCATGAC TTAGGCATCA ATGACCCTTG GTTTGAAGTC AATGGATATA CACTTCACAA TACAGATCGT TGGAAAGATT TGAACCCCAA ATTCGTCCTC CAAGTGTACC GGGATGTAGT TGCCACAGGC GACAAAAAGT TTGCATCAGC GGTCTGGCCC TCAGTGTATG TTGCAATGGC ATATATGGCT CAGTTTGACA AAGATGGCGA TGGAATGATT GAGAACGAAG GATTTCCAGA TCAGACTTAC GATACATGGT CCGCGTCTGG TGTAAGCGCA TACTGTGGTG GACTTTGGGT GGCTGCACTG CAAGCTGCAT CCGCATTGGC ACGCGTAGTT GGTGACAAGA ACTCACAGGA CTATTTCTGG TCAAAGTTTC AGAAAGCAAA AGTTGTATAT GAGAAGAAGT TGTGGAATGG ATCTTATTTT AACTATGACA ACAGTGGAAG TCAGTATAGC TCGTCTATCC AAGCTGATCA ACTAGCTGGT CAATGGTACG CGAGAGCATC AGGCCTTTTG CCTATTGTAG ATGAAGACAA GGCAAGAACT GCTTTGGAGA AAGTTTATAA CTTTAATGTG ATGAAGATTA AAGATGGGAA ACGTGGGGCT GTAAATGGGA TGCATCCCAA TGGAAAAGTT GATACAGCAT CGATGCAATC ACGAGAGATA TGGTCCGGTG TTACATATGC GTTGTCTGCA ACAATGATTC AAGAAGGTCT AGTCGAAATG GCGTTTCAGA CTGCAAGTGG TGTCTATGAA GCTGCCTGGT CTGAAGCCGG ACTCGGGTAC TCCTTTCAGA CGCCTGAAGC TTGGAACACA AATGATGAGT ATAGATCACT GACTTACATG CGTCCCCTTG CAATATGGGC TATGCAATGG GCACTGACAA AAACCAGTCA AAAACAGCAA CAACTTGGTC TTGAACCAGA ACAAGAACCA GAACTAGAGA CTAACTCTTT AATGAAACAT GATATCGGGT TTTCTCGGGT TTCTAGGCTT CTGAATCTAC CTAATGAAGC ATCAGCTAAA AGCACACTGC AGACTTTGTT CGACTATACT TGCAGGAGAC TGATGTCATA G 
Length2871
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12804747.. 12808552
Download Sequence
A.thaliana
AGI-codeAT5G49900.1
DescriptionBeta-glucosidase, GBA2 type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.3875 Ahg943129 Copper amine oxidase family protein
22.3159 Ahg920054 Flavin-binding monooxygenase family protein
28.3019 Ahg491400 gamma vacuolar processing enzyme
32.8329 Ahg328437 Protein phosphatase 2C family protein
34.2929 Ahg490488 TRAF-like family protein
37.081 Ahg482040 Plant protein of unknown function (DUF828)
37.4166 Ahg484673 NAC domain containing protein 3
39.7492 Ahg919779 branched-chain amino acid transaminase 2
40.4969 Ahg490373 RING/FYVE/PHD zinc finger superfamily protein
45.299 Ahg486597 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression