Detail



ID : Ahg331822

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331822|fgenesh1_pm.C_scaffold_8001165
Sequence
ATGGATTCAA TTCAACAAGA CAGATTATCA AGTCTTCCCG ACGTTCTTTT AATTGTGATC ATCTCTTTCT TGCCGTTTAA GGAATGCGTA AGAACCAGTG CTCTCTCCAG GAGGTGGAGG TATCTCTGTC AGGAGACCAG AAACCTTTCT TTTAGGGAAT CTGATTTCGT GAGTCCTTAT ATCACTGGTG AATATTCGAG ATTTGCAGCT TGTGCTTCAT TTTTTAGTTT TGCGGATAAT TGGCTCTCTA GAATTCAAGA TCAGGTCGTC GAAAGCTTCG AGATTTGTTT CTCCAATCCG GTGGGTTTCG AGCATAAGAT CGAGGCTCTG ATCGAATACG CTGTCTCCAA ACGAGTGAAG AATCTAGTCA TTGATTTGTC AAACCCCGCT TGGAGAAACT ATAATGATAT ATCATCAGTC TGTGTATCAT ATCTTCATTT TATCGTTACA TTGCCCAAAA GCGTTTACAG TCTAACAACC CTTGAGTCAC TGAAGATCTA CGGGTGCAAG TTTGATCCTT CGAGATTCAC AAACCCGGTA TTGCTAAGAA GACTCTCTAT TGGTTGGATG AGACTTGAAA ACCTCCAATC TTTACTATCA AAAGCTACTT CCCTCCTGAG TCTAAGTATC AAAGAATGCT GGGGCGTTGA TATGACGTGG ATGGCCGGGC AGTTTAGAGA GCTAGTCCTT GAGAATTTAG ACTTCAGTTA CATGCAATGT TCCTTTGAAC TGCCTCGTAT ACACAGCTTA AAGTACTCAG GCCAAGTTTT TGACTTTTAC TTCGACATCA TGAATGTGAT CATACCAAAG GTCTACTTGG ATTTTGGAGA AGAGCGTGAG TATGATCAAC CGACTCAGTC GACAAGAATA TCTGGTGAAG TTATATCTCG TATCCTCAAC GATCTCAGAG CAGCTAGCAC CTTAGCCGTT TGCCCTTATA TCCTCCAGAC AATCCGAGAA TGTAAAAAGC CATTTTATAT GCTTCAACCT ATGGAAACAC GACACTTGGT GCTAAGAACG AAGATGAGTA CGAAGGAGTT GAATGGAATC ATTATTCTTC TCAAGAACTG TCCAAACTTG GAGACTCTAA GTTTTGAGAT TCTTCCTTCA CGTCCTTTCC AGAGAAATTC GTCATATGAA GGGATCGATC CGAAAACGTT TTGGATGCAG AACAGAACAT GTGAGAGTCT AAGGAAGACA CTGAAGGTCG TGGTGGTAAG GGACTTTGGT GGTTCCTCAA ACGAGTTAAA TGTATTGAGG TATTTGATTC GATTAGCGAG CGGGGGTGGA AATGCATTGG AAAGGGTAGA GCTTTATGTG CCGAATGGGA TGGAAGAAAG TCAAGCGATG GTGGTATTTG CTAAAGCGGA GATGTTACAG AGAACTTCGA AGCATGTACA AGTTCTTTGT GCACAACTCT TGGAAAATTG A 
Length1431
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15771324.. 15773213
Download Sequence
A.thaliana
AGI-codeAT5G54820.1
DescriptionF-box/RNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.12311 Ahg921171 Plant thionin family protein
4.89898 Ahg477478 TRICHOME BIREFRINGENCE-LIKE 20
7.74597 Ahg948195
10.7238 Ahg910850 HSP40/DnaJ peptide-binding protein
13.1149 Ahg905519 CDPK-related kinase
15.4272 Ahg492378 Plant invertase/pectin methylesterase inhibitor superfamily protein
20.3961 Ahg323032 cytochrome P450, family 702, subfamily A, polypeptide 8
22.3607 Ahg915921 WRKY DNA-binding protein 49
22.8035 Ahg925942
24.4949 Ahg887424
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression