| Annotation |
|---|
| Description | jgi|Araly1|477478|fgenesh2_kg.3__179__AT3G02440.1 |
| Sequence |
ATGGAACTTC CCGCGACAAA GTTACGAATA GGATTAGTGA TATTTCCTCT TATTCTACTT ACAATAGCTC CAATCCTTTA TCTCTTTTTT GGTTATCCTA TCTATTATTC AACATCATCA ATATACAAAC ATTTATCGAA TTCATCATCA TCGGCAATAT CTTATCCATC TAGGTATAAT CATTCATCTA GTTCATCATC ATCAGATTAT TATAAGACAT CATCATCAGA AGATTCAGAA CCATCGTTGT ATGATAATGG TTATGACGAC ACATATCATG ATCCCAAGTC ATCATCTTTG CATAACAATG ATCGTCTATC CATCTCATCA TTGAATGTTG ATCATCAAGA AACTCCTAAG AAAGAGCGTC GCCGGAAAAA GAGAAAACGG AACTGCGATA TATTCTCCGG CGAGTGGATC CCAAACCCTG AAGCCCCGTA CTACACAAAC ACGACATGCA GGGCGATACA CGAACACCAA AACTGCATGA AGTTTGGGAG ACCTGATTTA GGTTTCATGA AATGGAGATG GAAACCAAAA GAATGTGAGC TTCCTCTGTT TGATCCTTAC GAGTTTCTGG AGATAGTTAG AGGAAAAAGA ATGGCGTTTG TTGGTGACTC CGTTAGCAGA AACCACGTTC AGTCTTTGAT CTGCCTACTC TCTCGGGTGG AACATCCTGA GGATGACTCA CAACAGGACT TTAATTTCCA AAGATGGAAA TACAAAACGT ACAACTTCAC GATTGCCACA TTTTGGACAA CCCATTTGGT TCGTGCTGAA GAAACCGAGA CTGGTCCGGC AGGTCCTAAT TCATTTTACA ATCTCTACCT CGACGAACCT GACCCAACTT GGGCTTCCCA AATCGTTGAG TTCGATTACA TCATCATCTC CTCTGGACAA TGGTTTTTCC GACCACTCTT CCTTTTCGAC AAACAAAAAA GGATAGGATG CTTGTATTGT TACATTCCCG GAGTCAGAAA TGTCGGGGCA CATTTCGCGT ATAGAAGAGC ATTGAGAACA ACGTTTAAGA CCATTCTTGG ATTAGAGAAT TTTAAAGGAG AAGTGTTTCT AAGGACATTT GCACCTTCAC ATTTTGAAGA TGGAGAATGG GATAAAGGAG CAATGAGACA GAGTTAG |
| Length | 1137 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 560066.. 561622 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G02440.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 20 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL20][TRICHOME BIREFRINGENCE-LIKE 20] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg331822 | F-box/RNI-like superfamily protein |
| 5.2915 |
Ahg315208 | Defensin-like (DEFL) family protein |
| 6.32456 |
Ahg916422 | low-molecular-weight cysteine-rich 12 |
| 7.07107 |
Virus1219 | |
| 10.9545 |
Ahg327726 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| 12 |
Ahg893746 | |
| 12.2474 |
Ahg925935 | |
| 13.2665 |
Ahg496109 | Protein of unknown function (DUF1635) |
| 17.0294 |
Ahg484349 | Cysteine/Histidine-rich C1 domain family protein |
| 17.4929 |
Ahg896603 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|