Detail



ID : Ahg332107

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332107|fgenesh1_pm.C_scaffold_8001450
Sequence
ATGGATCCCG CTTCTTCTTC CTCAAATCAG CGCAACCGAA TCGTCTCTTC TGGGGAAAGA CCAGTGATGG CCGATAATGG CGTCCAACAG GTTTCTCACG AAGACGAAAG GAACATTGTT TCTTCTTCTT ATTCTTCTTC TTCAATTGTT CCTTCTCCTG ATCCCGCTCC TTATTATAAC GTTCTTCAAA CCCCTACCAA TCTCTATCAC TACGATTGGG ATGTCGCACA TTCTGGTTAC GCACAAGGCA TCAATAGTTG GGATGGTTAT CCACGATATG CTGCTACTAC CCCTGAAGGC CTGCATGTCC CACCGGTTAG TATGACTTGC CCTATTTATG TTCTATCTTC CTCTTGCTAC TTAATTAACT TAGTTATTCT TTGTTCTCAG GTTGTCTACA ATGACAATTC ATCTCTTATG TACCAATATC CTGGTTATGG ATTCAACCCT TATCCTTCTA TAATGCTGGA GGGCCAAATT CCAGTCTCTC CAGCTTATTA CCCACCTTAT GGTGCACCTT CTGCTATGCA TTATATACCC TCAGATATTG ACCCAACATC TGCTTATATG ATTCCTTTTG GGCAATATGG TGGAGCCAAT TATTCCGGGA ATCAAGGGGA CACCTCTTTA ACATCTCATA TACCTTATCC TCAAACGATG GGTATACTTG GGCCATATGA CCATACTGCT TCACAGGTAC CGTTGCATGG GAGTGGGGTT GCTTCAAGCT CTTCTTTGGG AGGTTACTAT CATGTAGGAT CTTACCAGAG TCCCAACTCT ATCTCCTCAT ATTATGGAGC TGATAATCGA GCCAGATTAA CCCCCGACCT AGGTAAACGG CGAGAGAAGG AGCAGGGCTC TGTATCTATG ACCAATGATC TGTATGGTAA CCGAGGACCA AGGGCATCCA GCAGGGTAAA GAGCAAAAAC AGCTCTAAAC TTTGCTCTAC TACTGGTGAT TCAACGAGTG ATTCAAGTAC CGCTGGACCA AATCCCAGTT TGTACAACAA CCCAGAATTT GTGATAGATT ACAAGAATGC CAAATTCTTT ATCGTCAAGT CATTTAGTGA AGACAATGTC CACAGAAGTA TCAAGTACAA TGTCTGGGCT AGCACACCGC ATGGCAACAA AAAATTAGAT ACTGCTTATC GGGATGCTGA GAAGATGGGT GGAAAGTGTC CAATCTTTCT GTTCTTTTCG GTAAATGCTA GTGGACAATT CTGTGGGGTG TCGGAAATGG TTGGACCTGT AGATTTTGAA AAGGATGCTG GTTACTGGCA GCAAGACAGG TGGAGTGGGC AGTTCCCAGT GAAATGGCAT ATTGTGAAAG ATATACCGAA TAACCGATTT TGTCATATTC TTTTACAAAA CAATGACAAC AAGCCGGTTA CGCACAGCCG AGATTCTCAG GAGGTGAAGC TGCGTCAAGG GATTGAGATG CTTAGAATTT TCAAAGAATA TGAGGCACAC ACATCAATCC TCGATGATTT CGGCTACTAT GATGAGTTAG AGGGGCAAAA GGTGGGAGAA GATGGAACAA GGAAAGAAGC TAGGGAAGAA GAGACCTCCG TGGAGCAGTT ATCAGAGCGT CTTCAAGCTG TCACAGTAGA AGATGGCAAG GAGGAAAAAG AAGAGTTAAT AGCTGATTGA 
Length1650
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17348130.. 17351123
Download Sequence
A.thaliana
AGI-codeAT5G58190.2
Descriptionevolutionarily conserved C-terminal region 10
TAIR curator summary
Alias[ECT10][evolutionarily conserved C-terminal region 10]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg314795 Kinase-related protein of unknown function (DUF1296)
22.2486 Ahg931278 RING/U-box superfamily protein
37.229 Ahg474805
39.7115 Ahg314259 novel plant snare 12
40.2989 Ahg921503 ARM repeat superfamily protein
42.0476 Ahg488508
49.0204 Ahg478531 Protein of unknown function, DUF593
53.6377 Ahg332577 DEK domain-containing chromatin associated protein
63.3561 Ahg478089 Transcription factor jumonji (jmjC) domain-containing protein
64.8074 Ahg490170 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression