| Annotation |
|---|
| Description | jgi|Araly1|333274|fgenesh1_pm.C_scaffold_283000002 |
| Sequence |
ATGATGAGAG GTGCTGCTTC GACCGGAGTA GTAATGGTCA TGGTTATAAT GATACTTGTG TTGTTAAACC AAACAGAGAG TGCTAGTGTG AATGGTTCAT CACAATCACA TAGAAAGTTT TGTAATATTT ATTTAGGAAG TTGGGTCTAT GATAAATCTT ACCCTCTCTA TGATTCCAAG ACTTGTCCTT TCATCGAGAG ACAATTTAAC TGCAAGTCCA ATGGTCGCCC TGACAAAGAG TACCTCAAGT ATCGGTGGCA ACCTTCCGGT TGCAATCTCC CCAGATTCAA CGGCTTAGAT TTTCTTGGAA GGATAATGAA AGGGAAGAAA CTGATGTTCG TCGGAGATTC ACTGAGTCTA AACCAATGGC AATCTCTCAC GTGTTTGCTC CACAACGTTG CACCAAACGT CAATTCCACC CTCACACGTT CCCCTTCTGG CCTCTCTGTC TTCTCATTCC CCGCTTACAA TTCTTCGATT ATGTTTTCAA GAAACGCGTT TCTGGTGGAT ATAGTCGGAG CCCCACCTAA GCGAGTGATG AAGCTCGACT CCATCTCGAG TGGTTCGTTG TGGAAAACCG CAGATGTTTT GGTCTTCAAC TCTTGGCATT GGTGGCTTCA CACCGGCAGA AAACAACCAT GGGACGCAAT TATGTCCGGG AATGTAACGG TTAAAGACAT GGACCGGTTA GTGGCATATG AGAAAGCAAT GATGACTTGG GCTAAGTGGA TTGATCAGAA CATTGATCCT TCCAAAACCA AAGTCTTCTT CCAGGGTGTT TCTCCGGACC ATGGCCGCGC AAGCGAATGG TCGAAACAAG GTGGCAAAGG CAGTTGCATT GGAGAAACAA AGCCGATTAT GGGATCGAAG TACTGGGCGG GACCACACCG AGCGGAGATG GTGGTGGCGA AAGTGATAAA GACGATGAAG AATCCGGCGC GGTTAATGGA TGTGACATTA ATGTCTCAGC TAAGGAAAGA TGGACATCCT TCAGTATACG GGTTTGGCGG TCACAAGATG CCGGATTGTA GCCATTGGTG TCTCTCTGGA GTCCCGGATA GCTGGAACCA ACTCTTGTAT TCTGAGTTGT TTCATTCTTA A |
| Length | 1101 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_283: 2849.. 4793 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G30900.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 43 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL43][TRICHOME BIREFRINGENCE-LIKE 43] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg496808 | HAESA-like 2 |
| 8.7178 |
Ahg940104 | Protein of unknown function (DUF620) |
| 9.59166 |
Ahg930275 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
| 30.5941 |
Ahg933672 | Ubiquitin carboxyl-terminal hydrolase family protein |
| 32.6343 |
Ahg474834 | Pectin lyase-like superfamily protein |
| 47.833 |
Ahg919413 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 51.0882 |
Ahg483745 | |
| 56.5774 |
Ahg324161 | myosin heavy chain-related |
| 62.4019 |
Ahg922097 | multidrug resistance-associated protein 12 |
| 85.7438 |
Ahg911231 | IQ-domain 28 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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