Detail



ID : Ahg474834

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474834|fgenesh2_kg.1__4788__AT1G56710.1
Sequence
AAAAATGGCA TTACCTAATT CACTCTTCTA TACAATCTTC TTCATCTTAT TCTCATCGAT TCCAATTGCT CACAACATGT ATCTAAGCCC ATCACCGGCT CCAAATCCGG CTTACGATGA TAACGACAGT ATTGGGCCAA CCGTCTTCGA CGTGACTTCC TTTGGAGCCA TCGGAGATTG TGCGACCGAC GACACATCAG CATTCAAGAT GGCATGGGAC GTTGCATGTA TGAGCACAGG GTCTAAGTCA GCCCTGCTTC TTGTCCCTTA CACCTTCTGT TTCTTGGTCA AGCCAACCAC CTTCAATGGT CCTTGTAGAA CCCACCTTGT GCTACAAATC GACGGGTTCA TTCTGTCGCC GGATGGACCG AGGTCATGGC CGTCGAATTA CCAGAGGCAA TGGATGATGT TTTACAGAGT GAATGGATTA TCAATTCAAG GCTCAGGTTT TATCAACGGC CGTGGCCAGA AATGGTGGAA CCTTCCTTGC AAACCTCACA AGGGCATTAA CGGAACGACT CAACCCGGTC CTTGTGACAG TCCTGTAGCG ATTAGGGTAT TTCAGAGCTC AAAAGTGAGA ATCCAAGGGC TTAACTTCAT GAACAGCGCC CAGTTCCATG TAAGGTTTGA TAACTGCAGT GACGTAGTTG TTGATTCCGT GACAATCAAG GCACCAGCTT CTAGTCCTAA CACAGATGGG ATCCACATTG AGAATACACA TAACGTTCAG ATTCGCAATT CCGTGATTTC CAACGGAGAT GATTGTATTT CAATTGGAGG CGGCTGCTTT AATGTCGATA TTCAGAATGT TACGTGTGGT CCAAGCCATG GGATTAGCAT AGGTAGCCTC GGAGTCCACA ACTCGCAGGC CTATGTCTCG AACATAACAG TGACAAACTC AACCATATGG AACTCAGACA ACGGTGTTCG GATCAAGACA TGGCAAGGAG GGTCAGGCTC GGTTTCAAGA ATTGTGTACA GTAACATATT GATGGTGAAC GTTCGTAACC CTATAATGAT AGACCAGTAC TACTGCCAAA CCAATAACTG TGCTAACCAA ACCAGCGCAG TCATAATTAG CGATGTTCTG TATGCAAATA TCAAAGGGAC TTACGACCTG AGAAGCCCAC CGATGCATTT TGGTTGCAGC GACTCTGTCC CCTGTACCAA CCTGAGACTC GCGGATGTTG ACCTGTTTCC TTCCAAAGGC CAGCATTTGG AAAACCCGTT CTGCTGGAAC GCATATGGAA GCACGCAGAT TACAGTGCCA CCTGTTTATT GTCTGCTTGA TGCACCTCCG GACTTCTAAC AGAAGAAGAT GTGTTCAACG CTGTTCACCA ACTTGTATTT GATTCAGTAA AGAGTATCGA AGAAATTAGT CTAAAGGTTA GCCATTATCC TGAAAGTATG AAACTTTTTA GGATGCACAC TACAAACAGT TGTGATAGGC TTAAAGAAGT C 
Length1461
Protein Sequence
Protein Residue
Map Locationscaffold_1: 31108171.. 31110040
Download Sequence
A.thaliana
AGI-codeAT1G56710.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.87401 Ahg490221 Protein phosphatase 2C family protein
8.48528 Ahg345894 Protein kinase superfamily protein
12.3288 Ahg318437 Pollen Ole e 1 allergen and extensin family protein
25.3772 Ahg934564 PYR1-like 4
28.3549 Ahg492514 WRKY family transcription factor
30 Ahg490995 ubiquitin-conjugating enzyme 17
32.6343 Ahg333274 TRICHOME BIREFRINGENCE-LIKE 43
33.4664 Ahg475793 suppressor of npr1-1 constitutive 4
34.2929 Ahg930357 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
55.3173 Ahg493003 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression