Detail


ID : Ahg336994

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|336994|fgenesh1_pg.C_scaffold_1003559
Sequence
ATGGCGGTGG ACGGTGACGG AACTGTTGGT GGTGGAGATT CTCAACCACC GGTGACTACT GCGGCGGCGA CGACAGAGAT GGCTATCGCG AGGCTGAGTC GGTTTCCTAA CATGGAGCAT ATTTCTGATA ACTACGACGA TCTGAAACTG GAATTTAGCT CTTCCATGTT AAGCTCGCTA GAGAAGTACT TGCCGCCGGC AATGCTCACG GCGAACAGAG AAGAGAAGGC CAAATTCATG TCAGACATTT TGCGCAAGTA CATTTCCCGC GAAGAATGTT CCAAAGCTAA TTGGCGCAAG ACCTATTCGC AGAGGATAAA ATCCAATTAT CAGCCACTTT GCAGGGAGTT GTATAATTTT GATCCCGAAT TGTTTCTGCT TCCCTCTTTC CGAAAGGCGA TCAGCGACAA CACAGAGGAA AGCTTCAGAC GCATCATTTC TGAACCGTTT CCTGGTGTTT TTGTCTTTCA AATGTTTCAG CCTGATTTCT TTCAGAAATT GATAGTAGAG GTAGAAAATA TCAAAAAGTG GGCTCATGAG AAAAAGTTCC AAATTAGGAG ACCGTACCAC ACGAGTAGAT ACGGTGTTGT GCTTGATGAC TTTGGCCTGG ATATCATGCT TAAGACACTC ATGGAGGATT TTATCTTTCC TATTTGCAAA GGCAAGGAAG TATTTTACTT AAACGCATTA GAAAGACTTC TATTTTTCCC TGAACTGTGT GGAACAATGT TTGACTCTCA CCATGGATTT ATTATTGAAA ATGGTGAAGA TAGGGATGCT CCATTAGACC ATCATTTTGA TGATTCAGAA ATAACATTGA ATGTTTGTGT GAGGAAACAA TTTGAGGGAG GGGAAATATC TTTCATTGGC ACACGATGCG TGAAACATAT GCGAACAAAT ATAAAGCCAG AGGAAGTTTT TCATTACAGT CATACACCGG GTCAAGCTAT ACTTCACCGT GGCCGCCACC GCCATGGTCC CAGAACCACC ACAAATTCTT GTTCTCGGGC CAATATGATT CTTTGTTGCA GAAACTCTTT GTTTAGAGAG ATGGAAACTT ATGAGAAGGA ATTCCCAGAG TGGTGCGGTC AATGCGCCCA TGAAAAGAAA GAAAAGGAAA GCCAGAGTCT TGCTGCCAAA AGAAAGGGGA TGATTAGAAT TGTGGGTGGA GGCAAAGCTC GATGA
Length1185
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23717552.. 23724693
Download Sequence
A.thaliana
AGI-codeAT1G48740.2
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.6102 Ahg901222 homeobox-3
34.5543 Ahg917658 subtilase 4.13
34.8138 Ahg950597 Undecaprenyl pyrophosphate synthetase family protein
38.8072 Ahg341711 phosphatidic acid phosphatase-related / PAP2-related
42.5323 Ahg494865 Pectin lyase-like superfamily protein
46.6154 Ahg915034
48.2183 Ahg495891
49.0918 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
51.0686 Ahg492707 NITRATE TRANSPORTER 1.8
51.3809 Ahg325356 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression