| Annotation |
|---|
| Description | jgi|Araly1|337252|fgenesh1_pg.C_scaffold_1003817 |
| Sequence |
ATGGGAGCCC AAGGCAGTTC TTTGCCATTT CGAAAATCAA TTTTTGATTT TAGGAATTGG GATGTTCCTA TCATAACGGA TGTCAGAGAA AAGCTTGAGA ATATAAAGCA ACTTCTTAAG TCTCATCCAT CTGTGAGGGA AGAGTTGGTA ACCAACTTTT GCAGCAGGGA GCTTACCTCA TATGAACAAA AGTTTTTAGG AGCTGAATTG ACAAAGTTGG ATGAAATACA GCGGATATAC AATCAGATAA ATTGTCATAT CCGAACAAAT CAAGAAATTT GGAAGATTTT TCCTGCTTCG TGGCATGTGC CTTATGGACT GTGCATCAAG ATGTGCAAGA TAACAAGGGA CCAAGTAGAA TCTATTATGG TTAACATGAA AGAGAAGCCA ACTGTAGCGA GATTGCTTCA GGAACTGAAA AGGACGCTAA ATTTTGAACT GGAACTTGAA ATGAAATTTG GTGGTGGTGT TCCTACTAAG AATATCGGAG ATGACATTGA GGAAACTGTT GACGGGGAAA ATTATAGTCC GAATGTATCC GAAATTCACA TGATGTATGA AATGAAGTTT GCTGCTAATC ACGACTTGGT GGAAACTCAA AAAACGGGAA TCAAAGATTT ATCTGATTCT GGAGGCAGGT TTAACTTCCG TGGAATTATC TCTTCTTGCT TCGAGCCTCA TTTAATCCCT TATATTGAGG AGGAACTTAT GCAATGCCTG GAAAAAGTTG TTCAGGAGGA AACATGGGAT ATTGACGAGG AAAATCTAAA TAATATTTTA TCTAGCAGTA GAGAGTTGTT TTTGGCTATA AAGAAAAGCT ATGACAAGTG TAAAGCTCTG ACTAAGAACC TGACTTTATT CAAGTTATTC AAGGTCTTTC AACGAGTTCT ACAAGCCTAT GCTACAAAGC TATTTTTTAA GCTCTCCACA GGAGGCACTC ATAAACAGAT AAAGGTCTCG GGGATAGATG AAAGGGTGAT ATGTTACATA GTTAATTCTG CTGAGTATTG CTGCAAAACA TCTGGTGACT TGGCAGAAGA AGTCTCAACA ATTATTGACC CGCATTACGC AGATGGTGTA GACATGTCAG AGGTCCAGGA TAAATTTTCG TGCGTCATAA CGAAAGCATT GATGACACTA GTCCGTGGAC TGGAAACTAA ATTTGACACA GAAATGCAAG AGATGGCACG TGTTTCATGG GGCACACTTG AGAGTGTTGG TGACCATTCT CAGTACGTAA ATGGAATATA TACAATCCTT AAAAACAGCG TTCCTGTCCT CGGGAAACTT CTAACACCAG TTTACTTCCA ATTCTTCCTG GAAAAGTTGG CATCATCCCT TGGGCTACGG TTCTATGCTA ATATTTTCAG ATGCAAGAAA ATATCAGAAA CTGGAGCTCA GCAGATGTTG CTAGATACGC AAGCCATGGA GATGATTCTT CTAAATATTC CATCTCTTGA CAGACAGACT GTAAGTGCTG CAAGCTATTC GGAATTCGTG AAGCGTCAAA TGAGCAGAGC TGAAGCAGTC CTAAAGGGTC TTACGAAAGC CACTCAGCAG AGTATACTTG ATGATTTCAA TAAGCATGCC CCAAGAATCA CACAGCCTTT GGTTGCAGCA GAAAATCCAC AACCGGTTCC AATCCCACCT GCACCGCCAT CCGAAATCAC TATCCGGCTG TAG |
| Length | 1683 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 25587204.. 25592389 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G50500.2 |
| Description | Membrane trafficking VPS53 family protein |
| TAIR curator summary | encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress. |
| Alias | [ATVPS53][HIT1][VPS53][ARABIDOPSIS THALIANA VPS53 HOMOLOG][HEAT-INTOLERANT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg892257 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| 19.4936 |
Ahg927724 | Protein of unknown function (DUF679) |
| 27.3496 |
Ahg916527 | |
| 33 |
Ahg891433 | |
| 33.5857 |
Ahg486140 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 34.2929 |
Ahg936036 | nicotinate phosphoribosyltransferase 1 |
| 35.0714 |
Ahg936444 | LETM1-like protein |
| 38.923 |
Ahg318460 | |
| 43.8748 |
Ahg948998 | |
| 44.587 |
Ahg474323 | Mannose-binding lectin superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|