Detail



ID : Ahg486140

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486140|fgenesh2_kg.5__2132__AT3G56970.1
Sequence
AAAACAACTT CAAGAAGAAA ACTTGTCCTT GATTAAGGAA AAAATGTGTG CATTAGTCCC TCCATTGTTC CCAAACTTCG GTTGGCCGTT GACGGGACAG TGCGAAAGCT ATTACGGTGG CGGAGATAAC CTTAATAACG GCACATTTCT TGATTTTCCG GTACCACCGA CTTATGGAGT ACTGACTCAT CATCAGAACA GCTTGGAAGT ATCTGTTTCG TCAGAAGGAA ATGAGATAGC CAACAATCCG GTCGTGGCCA AGAAGCTTAA TCACAATGCT AGTGAACGTG ACCGTCGCAA GAAGATCAAC TCTTTGTTCT CATCTCTCCG TTCATGTCTT CCAGTTTCCG ATCAATCGAA GAAGCTAAGT ATTCCTGAAA CGGTTTCGAA GAGCTTAAAG TACATACCAG AGCTGCAACA GCAAGTGAAG AAGCTACTAC AAAAGAAGGA AGAACTTTTG GTTCGAGTGT CAGGTCATCG AGACTTTGAA ATTTACGATA AGCAGCAATC AAAGGCGGTC GCTAGTTATC TCTCAACAGT TTCTGCCACT AGGCTTGGTG ACAACGAAGT GATGGTCCAA ATCTCATCGT CCAAGATTCA TAACTTTTCG ATATCAAATG TGTTGGGTGG TATAGAGGAA GATGGGGTTG TTCTTGTGGA TGTTTCATCT TCAAGATCTC AAGGAGAGAG GCTCTTCTAC ACTTTGCATC TTCAAGTAGA GAATATGGAT GACTATTACA AGATTAATTG TGAAGAGTTA AGTGAAAGGA TGTTGTACTT GTACGAGAAA TGTGAAAACT CGTTTAACTA GGTTTTTTAG TTGTGTCCTT TTCTCATAAA AATCTAACAC TGATCTTGAC C 
Length861
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17181801.. 17187359
Download Sequence
A.thaliana
AGI-codeAT3G56970.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summaryEncodes a member of the basic helix-loop-helix transcription factor family protein.
Alias[BHLH038][bHLH38][ORG2][basic helix-loop-helix 38][OBP3-RESPONSIVE GENE 3]
Gene coexpression
MR
MR Locus Description
1 Ahg902084 basic helix-loop-helix protein 100
6.48074 Ahg922027 cyclase associated protein 1
13.6382 Ahg930229
14.6969 Ahg902169
17.6068 Ahg324207 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
18.1659 Ahg946631
28.8444 Virus1425
32.8634 Ahg937770 glutamine synthetase 1.3
33.5857 Ahg337252 Membrane trafficking VPS53 family protein
36.1109 Ahg923037
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression