| Annotation |
|---|
| Description | jgi|Araly1|337635|fgenesh1_pg.C_scaffold_1004200 |
| Sequence |
ATGAGCAAAG TTGAGATTGA AGAAGATATG GAAGGAGATC GCATCTCAAC GAACGATTAC TACTTCGAGA AGATCGGCGT ACCTATCAGT ATCAAAGAGG ATGACGCTCA ATACGATATC GAAAACCCTC CGTCACAGCC TCTCGCTATC TCCGAACGTC ACGGCGTCGT CTTCGTCGCC CATTCCTCCG GGTTTTTCGT TGGGAGGACT AAGGATGTAA TTTCTGCATC GAAGAACAGT AACGGGAACG GTGATAAGGT TTATATCCAG GATTTGAGCC TCGTTGATGT TCCTGTTGGG GACGTTCGTA TATTGTCTCT CTCGGCGGAT GATTCGATTC TGGCTGTCAC CGTTGCTGCC GATATTCATT TCTTCTCTGT GGATTCACTT CTTAAGAAGG ATGCAAAACC TTCTTTTTCT TATTCACCTG ATGAGTCAGG CTTTGTTAAG GATTTTCGGT GGATAAGGAA AGATAAGCAT TCTTATCTTG TTCTTTCGAA TACTGGGAAG CTCTTTCATG GAATTGACAA TGCACCCCCT AGACATGTTA TGGATGCTGT TGACGCCGTT GAATGGAGTT CAAAAGGGAG TTATATCGCT GTGGCCCAAG ATAACAGCCT GCGGATTTTA TCGTCAAAAT TTAACGAGAA GCGGTGCATA GCACTATCAT TTGACGCCTG GATTGGTGAT TCTGATGAAG ACTGTTCAGT GAAAGTTGAT TCTATCAGAT GGGTACGCAA CAACTGTATC CTTCTCGGAT TCTTTCAGCT GATTGATGGC AGGGAAGAAA ATTACCTTGT TCAGGTTATT AGGAGTCCAG ATGGGAAGAT TTCTGATGGT TCATCCAATC TGGTTGCTTT ATCCTTCTCC GATTTGTTTC CATGTTCTAT GGATGATATT GTTCCAGTTG GTGTTGGACC TCATTTGCTC TTTAGCTACA TAGACCAATG CAAACTGGCG GTCACAGCAA ACAGAAAGAG CATAGATGAG CATATTGTTT TGCTGGATTG GTCACCTGGT GATAATAAAA CTGCAGTTTC CGTTGTTGAT ATTGACCGAG AGACCTTTTT GCCAAGGATT GGGCTCCAAG AAAATGGCGA TGACAATACG ATCATGGGAC TCTGTATCGA TAGGGTTTCT GTTGCAGGGA CTGTTAATGT CCGTTCCGGA AGTGATGAAC TTAAAGAACT CCTGCCATAT TTTGTTCTTG TGTGCCTCAC TTTGGAAGGA AAGCTGGTCA TGTTTAATGT CGCTAGTGTT GCAGGACCCC CAGCTTCATC TGATGCTGAT TTGGCCTCTT CTTCTGATAT AGAAGATGCT TATACCCCTT TGATTGAAGA TGACCTTTCT AAACAATCTT CTGAAGAGCC TGAAGAACAT CAGCAGTTGA ATGTTTCAGT ACAAAATGAA CAGAAGCACC TCAACGCAGA GAAGTTCTCT ACTGAACAAA GTTTCCCAAA TGAAAACATT TTTAGTAAGG AATTTGAGTC TGTAAAAAGT TCAGTGTCTG AAGACAACAA GAAGAAGCAA GAACCATATG CTGAAAAACC GTTACAAGTA GAAGATGGTC AACAAAGCAT GATTCCTAGG CAGTTCGGAA CAAGTTTTGG GCAATCACCT GTGTCCTTAG GATATGACAC CAACAAATTT TCAGGTTTCG GTCCTGCCCT CTCTGTTTCC GATAAGCTTC AGAAAGATGT ATCTGCGCAG TCCAAGTCTA TGCATTTGCA GGCCAATGTT GAGTCAAAGA GTACACCAGC TTTATTTGGA TCTCCTGGCC TGCAGAACTC AATTTTTCAG TCACCACTAA ATACGTCATC TCAGCCATGG TCAAGTGGGA AAGGCGTCTC ACCTCCAGAT TTTGTACCTG GTCCCTTTCC TTCTGTGAAA GATACTCAGC ATAAGCAATC TGTACAGTCT GGAACTGGTT ATGTGAATCC TCCTATGAGC ACTAAAGAAA CACCTGTTCA AGTTATTGAG ACTGGTAGAG CATCAGCTCT GAGCAATTTA AGTCCTCCGC TAGGCCAAAA TTGGGACACT AATGAAGGGG TGGAGAAAAT TGAGCCAATA CCTTCTATCC GTGCCTCTCA ATTGTCACAA CAGGTGAAAT CTTCCTTCGA AAAATCGGCT AGTCATCAGC AGCACAAAAC TCCGCTCAGT GCTGGACCTC TGAGACTTGA GCATAACATG TCAAAGCAAC CCAGTAATAT AAATGAGATG GCCAGAGAAA TGAATACACT TTTACAGTCC ATTGAAGGAC CGGGTGGTTT CAAGGATTCT TGCGAAGTTT TACTGAAAAG CCATGTTGAA GAACTGGAGC AAGGACTTGA AAGTCTTGCT GGCAGGTGCC AAACGTGGAA GAGCACAATT CACGAGCAGC AAGCAGAGAT CCAACATCTT CTTGACAAAA CAATTCAAGT TTTGGCAAAA AAGACATACA TGGAAGGTAT GTATAAGCAA ACTGCTGATA ACCAGTACTG GCAACTTTGG AACCGCCAGA AGTTGAATCC TGAGCTTGAG GCCAAGCGGC AGCATATTAT GAAACTAAAC AAGGATTTGA CTCATCAACT GATTGAACTA GAGAGATATT TTAATCGGCT TGAACTCGAT CGCTACCATG AGGATGGTGG ACATCCTGTG GCACGAAGAG GCGTGCCAAG TAGGTCTGCT CCTTCAAGAC GTGTGCAATC CCTTCACAGC CTTCATAACA CAATGAGTTC CCAATTGGCA GCTTCTGAGC AACTCTCTGA GTGTCTCTCA AAACAAATGA CATATTTGAA AATCGATTCA CCTGTAAAAA AGAATGTGAA GCAGGAGTTG TTTGAGACAA TTGGGATCCC TTACGATGCT TCTTTCAGCT CACCAGATGC GGTAAAAGCT AAAAATGCAT CTTCAGCAAA AAACCTATTA CTGTCTTCTA TTCCCGCAAG TATAAATGCA CAGTCAAGAC AACGTCAGTC ATCTGCTATG AAAAATTCTG ACCCTGAAAC TGCCAGGAGG AGAAGAGAAT CACTAGACAG GAATTGGGCT GCTTTTGAGC CTCCAAAAAC AACTGTCAAA AGGATGCTTC TGCAGGAGCA ACAGAAGACG GGTATGAACC AACAGATTGT CTTAAGTGAG AGACTACGGT CTGTGAATAA TACACAAGAG CGATCACTGC TTCGCCTGAA AAATCATGCA TCACCTGTAG TCTCCTCAAA TAAGGGCATT ATGGAATCAT TCCAACAAGA CACATCTGAA GCTCAATCAA CCCTATTCAA AACGAGGCCA CCTATGCCCC AATCTAACAG TCCCTTTACC ATCTCTCCAA TCTCTGCCTC AAAACCAAGT TTCAATTGGT CTGGAAATAA GTCTAGCAGT ACAACTTCTT ATGCTGAGGA GTCTGCCCCG TCGCAGAATA AGGATACAAG GACAGTTTCA CAACCAGGAG GATCAAATTT TCTTCTGAAA CGACCAGTGG CCTCGACTGT ATTTGAACAG ACAGAAAAGA AGGCTGGAGA ATTCAAATTT TCTGAAGCTA AGGCCAATGC TTTTGTTGAA ACAGCTGCTG GAAGTGTGCA GCATCTTTCT ACCACATCAT CAGGATCTGA TTATGAATTT AGCAAAGGTT TTGGCGCTCA ACTTTCACCC ATGTCTTCTG GTGGACCAGC ATCTAGTTTC CCTTCCAAAT CGTTGTTTGG TTTCAAAACC AGTAGCAGTA TCTATGGTGA TAAAGTTACT TTTCCTGCTG CAACGGTATC AGTTTCTTCT TCACCTTTGT CTAGCACGCC ACTTGATTCC ACTTCCACTT TATCTACACC ATCATCACCT CCAATGTCAT CCTCTACACA AGATTCAGTT CCAGCATCTA TTCCCATTAG CTCAGCACCA GTCATGCAAA CGTTTTCAGT CGCATCTACA TCTACAGTTT CTGCTACGGG GTTCAATGTT CCATTTGGTA AACCGTTGAC CAGTGCCAAT GTAGATCTCA GTCAAGCAGC TCCGTCAACA CCTTCTCCAT CACCTGGTCC CACAACTGGT TTCTCTTTTA TTTTACCAGC TTTATCTCCA TCATCCCCTG AAATGGTCTC ATCCTCAACA GGCCAATCTT CATTATTTCC ACTATCTTCT CCAGCGTCGC AAGTGTCATC TGATCAGGCC TCTGCAACCA GTTCCCTAAC AGATAGTAGT CGTTTGTTCT CATCAAATTC CTTATCTTCG ACTCCTATTA CTTCAACCCC TCCTGATGCG TTTCAGTCTC CTCAAGCTTT CACCCCATCC TCTGCTGTGC CCATTACAGA GCCAGTCTCG GAACCCAAAA AACCAGAGGT TCAAAGTTCA TCAATTCTGA GTACGCAAAG TACTGTAGAT TCTGTAGCAA ATGCAACAAA AACACAGAAT GAGCCACGGC CGGTGAAAAG TGAAATTTCA AACCTGGAGA CTACAGTAAC CCCTGTCAGT TCATCTGGGT TCCTGTCTGG ATTTTCATCA GGAACAGAGT CTAGTCTTGC AAGCATGGCG GCTCCTTCAT TCAGCTGGCC AGGTAGTTCT CAGCCACAAC AGCAATCGTC TACACCTGTC CCTTTCCCTG CATCCTTACC AACTTCGGCG AGTCCATTTG GTGAGAAAAA AGATACTGTA GATACACAGG AAGATGAAAT GGACGAAGAA GCTCCAGAGG CTAGCCAGAC AACTGAACTT AGTATGGGAA GTTTTGGAGG TTTCGGGCTT GGGTCAACTC CAAACCCGGC TGCCCCCAAA TCTAATCCAT TTGGTGGTCC CTTCGGTAAT GCTACAACAA CAACAACAAG TAATCCATTC AATATGACAG TCCCGAGTGG CGAGCTATTC AAACCTGCAT CGTTCAACTT TCAAAATCCT CAACCATCTC AACCGGCAGG TTTTGGTGCG TTCTCTGTAA CACCTTCGCA GACACCTGCT CAGAGTGGAT TTGGCCAACC GTCACAGATT GGTGGGGGAC AGCAAGCTCT AGGGTCGGTT CTTGGCTCCT TTGGGCAGTC GAGACAGATT GGTGCTGGTC TCCCAGGGGC TACGTTTGGT TCTCCTACAG GATTTGGTGG CTCTAACCCA GGAAGTGGTC TGCCAAATGC ACCAACATCC GGTGGTTTTG CTGCTGCTGG TTCTAGTGCC ACTGGTGGCT TTGCCGCCAT GGCTTCAGCA GGTCGAGGCT TTGCTGGTGC TTCTTCTACT CCCACTGGTG GCTTTGCTGC CTTGGCCTCA GGTAGTGGAG GCTTTGCTGG TGCTGCTCCA GGAGGAGGAG GCGGTGGATT TGGTGGACTT GGTTCAGGCA CCGGAGGTTT CGGAGGCTTT GCTCCTCAGG GTAGTGGAGG TTTCGCCGGA GCAGGAGGAG GTGGTGGTTT TGGTGGTTTC GGCGGCCAAG CGCAAGGCCA AGCAGGTGGT GGTGGATTCT CAGCCTTTGG CGGCAACTCC GGAGCAACAG GAAAGCCATC GGAACTCTTC ACACAGATGA GAAAATGA |
| Length | 5478 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 27888161.. 27896565 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G55540.2 |
| Description | Nuclear pore complex protein |
| TAIR curator summary | |
| Alias | [LNO1][LONO 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 7.07107 |
Ahg495812 | DNA ligase IV |
| 7.54983 |
Ahg490126 | sensitive to freezing 6 |
| 8.12404 |
Ahg311660 | lipase class 3 family protein |
| 8.48528 |
Ahg941463 | E1 C-terminal related 1 |
| 9.16515 |
Ahg940499 | leucine-rich repeat transmembrane protein kinase family protein |
| 9.59166 |
Ahg478733 | evolutionarily conserved C-terminal region 2 |
| 9.79796 |
Ahg478494 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 9.79796 |
Ahg483031 | RNI-like superfamily protein |
| 11.225 |
Ahg494637 | Sec23/Sec24 protein transport family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|