| Annotation |
|---|
| Description | jgi|Araly1|478494|fgenesh2_kg.3__1195__AT3G11540.1 |
| Sequence |
AAAAATCAAA TCTCCTAAAT GGCTGGACAT ATTGTATGAA AGAAAATTTT CTTGCATATC TAGAGGGTAT TATTTTCTTT ATTACATGAC TAATTCCCTT TTTCCTTTTT TATTTTTTTT TAGCAAAATT ATTACTGTTG TCTATTTTGT CCGTTTTTCA ATACAATAAC ATTTTTGTTA AAAAAAAATA ACAATGAAGC CAGGAGAGCT AATCTGAGTC GTTGCCTCTG TCCACTGGCT CGGACCGACC TCGTACCTCT TCGTTTGTCC CGTGAGCATA TAATAGAGGC TACGCCGTCG CCGCCACCTC CGCTCCATCC ATTCACGGCC AAGCGACAGC TCCACCGCTT GGGTTTGGTT TCTGTTTTCG GAGGAGCGAG GCGGAGATCA GCTTCTCCTA TGTCAGCCCA CGGATATCAT TCTTCTTTAG CCACTCGATT TCGTCTCTAG CGGCTCCAGA AGTTTCGTCA AGTTCTTCTT TTCTGGTTCT GTGGTGAACA AGATTTTAGG TACAAAAAAT GGTGGGACTG GAAGATGATA CTGAGAGAGA GAGGTCACCA ATCGTAGAGA ACGGTTTTTC CAATGGATCT CGGTCTTCTC CTACACTTTC TTATGCCAAT ATCCTTCGGG CAAGAAACAA GTTTGCTGAT GCGCTTGCTC TCTATGAGGC TATGCTGGAG AAAGATAGCA AGAATGTGGA AGCTCACATT GGAAAAGGGA TATGCTTGCA GACACAGAAC AAAGGGAATC TAGCTTTCGA TTGTTTTTCT GAAGCGATCA GGTTGGATCC TCACAATGCT TGTGCCCTCA CGCACTGTGG TATACTCCAT AAAGAAGAAG GACGCCTCGT AGAAGCTGCT GAGTCCTACC AGAAAGCACT GATGGCAGAT GCATCATACA AGCCAGCAGC AGAGTGTTTA GCCATTGTTT TGACCGACCT TGGAACTAGC CTGAAGCTGG CTGGGAATAC TCAGGAGGGA ATTCAAAAGT ATTACGAAGC CCTTAAGATT GACCCACACT ATGCTCCTGC ATATTACAAC TTAGGTGTTG TATACTCCGA AATGATGCAA TATGACAATG CCTTGAGCTG CTACGAGAAG GCTGCACTTG AGAGGCCTAT GTATGCTGAA GCATATTGTA ACATGGGTGT CATTTATAAG AACCGTGGTG ACTTGGAGAT GGCAATCACT TGTTATGAGA GATGTCTAGC TGTGTCTCCA AACTTTGAGA TTGCGAAGAA CAATATGGCC ATAGCTCTGA CAGATTTAGG AACAAAGGTT AAACTTGAAG GCGATGTAAC CCAAGGAGTG GCATATTACA AGAAGGCTCT CTATTATAAC TGGCACTATG CAGATGCTAT GTACAATCTT GGGGTGGCTT ATGGTGAAAT GCTAAAGTTC GACATGGCGA TTGTCTTCTA TGAGCTTGCT TTCCACTTCA ATCCACATTG TGCTGAGGCT TGCAACAATT TGGGAGTACT TTACAAAGAC CGTGACAACC TTGATAAAGC TGTAGAGTGT TATCAGATGG CTCTATCAAT CAAACCAAAT TTCGCACAGT CGCTTAATAA CCTTGGTGTC GTCTACACAG TCCAGGGAAA AATGGATGCT GCTGCCAGCA TGATCGAGAA GGCCATACTT GCAAATCCCA CCTATGCAGA AGCTTTTAAC AACCTAGGTG TTCTTTACAG AGATGCTGGA AATATAACTA TGGCTATCGA TGCTTATGAG GAATGCCTTA AGATAGATCC AGATTCTCGC AATGCTGGCC AGAACCGATT GCTTGCCATG AACTACATAA ATGAAGGACT CGATGACAAA CTATATGAGG CTCACAGAGA CTGGGGTTGG CGCTTCACAA GATTACACCC TCAGTACACT TCATGGGACA ATCTGAAAGA TCCAGAGCGA CCTATCACCA TTGGATATAT CTCACCAGAT TTCTTCACTC ATTCAGTATC TTATTTCATT GAAGCTCCCC TTACGCATCA TGATTATACA AAGTACAAAG TGGTGGTTTA TTCAGCGGTA GTTAAGGCAG ATGCAAAAAC ATACAGGTTT AGGGATAAAG TGTTAAAGAA AGGTGGAGTT TGGAAGGATA TATACGGAAT AGATGAGAAA AAGATAGCAA GTATGGTCAG AGAAGACAAA ATCGACATTT TGGTAGAACT CACTGGTCAT ACGGCAAACA ACAAGTTGGG AACAATGGCC TGCAGACCAG CACCTATTCA GGTTACTTGG ATCGGCTATC CAAATACTAC GGGTTTGCCC ACGGTTGATT ACAGAATTAC AGATTCGTTG GCTGATCCAC CAGATACCAA ACAGAAGCAG GTCGAGGAGC TGGTTAGGCT TCCCGAGTGT TTTCTTTGTT ATACACCTTC CCCAGAGGCT GGTCCTGTTT GTCCAACACC TGCGCTTTCT AATGGCTTTG TCACATTTGG TAGTTTCAAC AATCTCGCAA AGATCACTCC TAAGGTGCTG CAAGTGTGGG CTAGGATACT TTGTGCAGTT CCCAATTCTC GTCTGGTGGT AAAATGCAAA CCTTTCTGCT GCGATAGCAT TAGGCAGAGG TTTCTCACAA CGCTGGAGCA GCTTGGGCTA GAATCAAAGC GTGTTGATCT CTTGCCGTTG ATTCTTTTCA ACCACGACCA TATGCAAGCT TATTCCTTAA TGGATATTAG TTTGGACACA TTCCCTTATG CTGGAACGAC GACTACTTGT GAATCTCTCT ACATGGGAGT TCCATGTGTT ACAATGGCTG GCTCAGTACA CGCTCATAAT GTTGGTGTCA GTCTTCTCAC TAAAGTTGGA TTAGGACACC TGGTTGCCAA AAATGAGGAT GAGTATGTTC AGTTATCTGT TGATCTAGCC TCTGATGTCA CAGCTCTTTC TAAATTGAGA ATGAGTCTCC GGGATCTAAT GGCTGGATCT CCTGTTTGTA ATGGTCCTTC CTTTGCTGTT GCTCTTGAAT CCGCATATCG GAATATGTGG AAAAAGTACT GCAAAGGTGA AGTACCGTCC TTAAGGCGAA TGGAAATGCT GCAAAAAGAG GTCCAAGATG ATCCCTTAAT CTCGAAAGAC TCGGGACCAT CAAGACTCAG CGTTACTGGA GAAGCCACTC CGTCTATCAA GGCCAATGGT TCTGCTCCTG TACCTTCTTC TTTACCAACC CAATCCCCGC AGATCTCAAA GAGAATGGAC TCCACTAGTT AGATACCCGG CAAATCAAGC TGCTGCAAAA TGCCGGGAAG CGGTGTGAAA GAAAGAGTCC ATGAGCTCTT CCTGCTTTTT ACTTCCAAGA CTATAGGAAC TAGACTTTAG ATTACTGCTT GTGTAGTAAA AAGAACAGAA AAACCACCTC TTTCTTTTGT TCCGTCTCCT TCCACTCTTA GTTTAGCTTT ACATGATTCT TGGGAAGTCG TTAGGTGGAA GTGGATTTGG AGTTTTTCTT CTCATTTGAG AGATCAAGTT GTTGTGTATC AATTAGGGTT TCAAGGCTTT TTAGGATGTT TTCATGTGTT GGATTTTGAA TCATATTATA GTAAATATAG TTATAGCCAA AGCTTTTCGG TGCCTT |
| Length | 3576 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4357104.. 4363135 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G11540.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress. |
| Alias | [SPY][SPINDLY] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg355577 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain |
| 3.31662 |
Ahg494091 | SMAD/FHA domain-containing protein |
| 4.47214 |
Ahg488249 | SWIB/MDM2 domain superfamily protein |
| 4.47214 |
Ahg481178 | Protein kinase superfamily protein |
| 5.2915 |
Ahg478089 | Transcription factor jumonji (jmjC) domain-containing protein |
| 6.32456 |
Ahg919535 | SIT4 phosphatase-associated family protein |
| 6.48074 |
Ahg496629 | splicing factor, putative |
| 7.07107 |
Ahg890636 | |
| 8.06226 |
Ahg932042 | ER lumen protein retaining receptor family protein |
| 9.79796 |
Ahg337635 | Nuclear pore complex protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|