Detail



ID : Ahg337885

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337885|fgenesh1_pg.C_scaffold_1004450
Sequence
ATGGTGAACC GCTACAATCC TCGCCGTCGT TTGCGTCGCC GCCTCCATGA AAAGAAGAGA GCAAAAGACT TAATCAGCTC TTTACCTGAT GAGATCCTCC AACATATCCT CTCCTTTAGT CCGACCAAAT TCGCCATCAG AACTTCCCTT TTGTCAAAAC GATGGAGGTA TATATGGTGC GATACACCTT CTCTCTCCTT TAGTAATTGT AGACAACGAC CTGCTTCGAT TGACAAAACC CAAATGTGCT ACAAAGCTCC CAAGATGAAG TATTTTCGTC TCAAAAACAA CTTGAAGAAC AATAATTACT ACATCAAGAA GTGGATCACA TTCGCCATGT CGCGTAACGT GGAGAATCTT TCCCTTGAAG TCTATGGTAC TGGTTTTAAA ATTCCTGCTT CCTTCTTCAT CAATTCCTCT ATCAAACAAC TCAACATTGA GTTAGCCTAT ATTTCTAGTC AATGCTTGGT ATCTTGGCCA TCATTAAAGA AATTGTCATT GCGTTGCAAA GATATTAAGG TTCTTGATCT CAGCAAATTG TTGCACTTGA GAACATTAGA AATAAACAGC CACATTAAGT TTCTAGGGCC AACGCAGATT GTTGCACCAC ATATCCATTG TCTTAGATTG ATAGCCTCTC AATTACCATG TACTTTAGTT GATATCTCGT CTTTAACCGA AGCGAAACTG GACATTTGTA TTAAATCAAG AGATGAGATC TTCAAGGCTG ATTTTCCTCA ACTTCAAGCC ATGGTGCTAG AGATGCTGGA AAAACTACAG AATGTTGAGA AGCTAACTTT TGGTGGAAAC TTTCTTCAGA TTTTATCTCT TGCTGGTGTT CGTGGTGTTC CTTTTCCGAT GTTAAAGGTC AAAACTTTGA TTCTTGAAAC GGTAATCTTT CAGTATGTTA TTCCTGGTAT AGAAAGATTG TTACAAAACT CATTTGAATT AAAGAAGCTA ATGGTACGAG CAAGGGATTG CAACACCATA CCGGGGAGTT ACTTGACAAA TTACTTGGAC TCACTAGGCT TGGATCCAAA CATATGTTGG AGATCGAAAG ATGGGAAGGT CATTTTGAAC AAATCCCATC GGAATATAGA GACAAAGCAT GTTACTTCGT TCATAGAATT TACGCTTAAA AACACAAAGA GCTTAGATAA GATGGTCGTA CAGTTGGACG AACGTTACAT TAGTTTTAGG TTTAAAGACT TGGTACCAAC ACTTATTCCC AACAATAATG TCTCCATTGG GCTCTCAACC AAGCCGATGA TATTAGGTGA GTGGTGA 
Length1287
Protein Sequence
Protein Residue
Map Locationscaffold_1: 31343969.. 31345542
Download Sequence
A.thaliana
AGI-codeAT1G60180.1
Description
TAIR curator summarypseudogene of F-box family protein
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg926304 Protein of unknown function (DUF1163)
5.74456 Ahg326811 glycine-rich protein
6.245 Ahg923226 Protein of unknown function (DUF1191)
6.9282 Ahg919507 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
8 Ahg475958 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
10 Ahg890702
10.3441 Ahg936150 F-box family protein
10.8628 Ahg314240 F-box and associated interaction domains-containing protein
15.8745 Ahg485883 RNA-binding (RRM/RBD/RNP motifs) family protein
17.088 Ahg948906 senescence associated gene 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression