Detail



ID : Ahg485883

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485883|fgenesh2_kg.5__1875__AT3G54770.1
Sequence
ATAATTCAAT TCACTCTTCT TCTCTCTCTA TCTATATCTC TGCTCTCTCT TTCTCTCGCA TACACACGAT CCAATGACAA CGAGCAACAA CGTGAACGGA TGTTTCGGAG ACACGAAGCT GACCAAAGTG TTCGTAGGAG GATTGGCTTG GGATACTCAC AAAGAAGCAA TGTATGATCA TTTCATCAAG TATGGTGACA TCTTGGAGGC AGTCATCATC TCCGACAAAC TCACTCGCCG TTCCAAAGGA TACGGCTTTG TGACTTTCAA AGATGCGGAA GCTGCCACGA GAGCTTGCGA AGACTCTACT CCGATCATCA ATGGCCGCCG TGCCAACTGC AATCTCGCCT CCCTCGGTGG CCGCCTTCGT AAATCCCCCA CCATGACCTC TCCTCAACAA GGAACAAAAA ATGGTAACAG GGCCACGTCA CCACATGTTG GAAATCATTC TCAATGGTAC TACCCGTCCG GTTTCACAAA CCAGCAATAC CAACTTCAAC AACAACATCA AGCCGTTCCT TTCTATGGGT ACCCTTCCGC CTACGTTGCC CCGAACATGA ACTTCAATCA AAAAGTTGGA TATGCCGGAG GAACCTATAT GAACGGATAC TATGCACAAA TGCAACCACA ACCGCAATCG CAGCCGCAAC CGCAATATTA CCACCATCAC ATGTATGGTG GAGGACGAGT TATGGTTGGG GCAGCAAGTC CAATGGTGCC TTTCTACACT GTCTATCCTT ATCATCAATC TCAAGCCTAC GGGTTTCCAC CACCTTCCTT TTCGAAACCC CTTTCTTTTT CCACTCCTCC CATATCAGGC ACAGTTGGAG GAGAGAGCAT ACAGAAGAAG GCCATACATT GATAGGCTAC AAGCTGTTGA TCAAAATTCA TTTTCTCCAT CTCACTAAGC TTTATTTTTA CCAGAGACAT GTATTTTTAA TAATTTAATT TCGTTACATT TAATCATTTA TTCATTGAAG CTAAGCT 
Length987
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16204031.. 16206372
Download Sequence
A.thaliana
AGI-codeAT3G54770.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[ARP1][ABA-regulated RNA-binding protein 1]
Gene coexpression
MR
MR Locus Description
15.8745 Ahg337885
22.5832 Ahg900378
22.6274 Ahg917658 subtilase 4.13
22.6274 Ahg951775
22.7596 Ahg479336 VQ motif-containing protein
28 Ahg485821 alpha/beta-Hydrolases superfamily protein
43.1277 Ahg323064
49.7494 Ahg914329
50.2593 Ahg495065 ethylene response factor 110
58.9491 Ahg921700 ENTH/VHS/GAT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression