Detail


ID : Ahg338459

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338459|fgenesh1_pg.C_scaffold_2000558
Sequence
ATGGATTCAT CAGCCATAGC TCTAGGAGCA CCTCAAATCA CCTCCTCGGA CGACGAAGAA CTGGATGAAG AAGAAGGCGA AGTCATCGAA TCAGCTCCTC CTCTCCAAAT CGGAGAAGAA AGAGTTCTCG GTTCTCTTCA CATCAAGAAG AAGATGCTTG AACTCGGTAC TGGCTACGAA ACTCCCGAAC ACGATGCCGA AGTCACAGTT CATTACGTTG GTACTTTACT TGATGGAACA ATCTTCTATT CAACAAGAGA TAAGAGTGAA CCTGTAACTC TAACGTTAAA GGTTGATGAA GTTAGGGCTC CTCGAGGCTT AGGACATTGT ATTATGACAA TGAAGAAAGG AGAAATTGCA TTGTTCACTT TACCTGTTGA TCAAGGTTAT GGAGCTGAGG GATACGATAA TGTGCCTCCC AATTCTGTTA TTCAGTTTGA AATCGAACTT TTCTCGTGGA TTGATGTTGT CGATGTTCGT AGAGATGGAG GTATTATCAA GAAAATTCTA GAGAAAGGTG ATAAGAATGG GAAGCCTAGT GATTTGGATG AAGTTCTTGT GAAGTACCAA GTTGAGCTTC TTGATAGTAC TATTGTTGCT AAATCACCGG ATCAAGGCAT TCAGTTTTGT GTGAATGATG GTCATCTCTG CCCAGCATTG CCACTGGCAA TTGTAAGTAT GCATCCTGGA GAAAAGGTCA AATTGATTGT CCAGCCTCAA TATGGTTTTG GAGAAGAAGG AAGAAGTTCA AGTGGGATTA TCAATGCTGT TCCACCAAAT TCTGTACTAA ATATTGATGT ATTGCTGGTG TCCTATAAAC CTGTTATTGA TGTCGTGGGT GATTCAAAGG TTTTCAAGAA AATTCTGAGA GATGGCGAAG GCTCAAGTGT TGCAGATGAT GGTGCCACTG TTACTGTCAG TTATGTTGCA AAGCTAGAGG ATGGAACTAT ATTCGAAAGG AAAGAAGTTG GGGAGGAAGA GCCACTTGTT TTTGTAACAG ATGAAGAGCA AGTCATCACT GGCTTAGACA AAGCTGCTGC AACAATGAAG AAAGGGGAAA AGGCGGTATT GAAAATAAGT CCTGAGTATG GTTTTGGAAA TGTGGAAGTC CAACGTGACC TTGCTAAAGT CCCACAATGT TCAACTCTCA TCTATGAAGT TGAAATGTTA GACTTTGTCA AGGAGAAAAC ACCAAGGGAG ATGAACAATG AAGAGAAGAT AGAGGCTGCT AATAGAAAGA AAGAAGAAGG CAATCTGCTA TACAAAAATC AAAAGTACCA GCGAGCAGCA AAGAAATATA ATAAGGCTGC AGATTTTATT GAGACTGGCA AATTTGAAGG TGATGAAGAA AAGCAACTCA AGGCTTTGAG AGTATCTTGC TTCTTGAATG CTGCAGCCTG TAGTCTAAAA CTGAAGAATT TTCGGGAAAC TATCATTCTA TGTTCGGAGG TATTAGATAT TGAGTTCCAA AATGTGAAAG CTTTGTATAG GCGAGCACAA TCCCATATTG AGGTGGGAGA TTTGATTTCA GCAGAAATGG ATATAAAAAA GGCTCTGGAG GCTGATCCTG AGAATCGGGA AGTGAAGTCC CTTTACAAAA CGCTGAAATT CGCTAAAGCT GAGAGCGACA GAAGAGACGC TAAGCTCTAT GCAAACATGT TTGCACTATC TAAAAAATTA AAAGTTGTGG CAGAAGAAGA GAAAATGGCA ACAAATATAG AGACTACAGA GCATTCTAAT GAACAGTCCA GCTGA
Length1755
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3727739.. 3731435
Download Sequence
A.thaliana
AGI-codeAT1G58450.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[TPR6][tetratricopeptide repeat 6]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg921723 DORNROSCHEN-like
10.0995 Ahg887617 GDSL-like Lipase/Acylhydrolase superfamily protein
18.9737 Ahg946832
21.5407 Ahg907325
23.2594 Ahg471318 FAD-binding Berberine family protein
23.4734 Ahg934346
30 Ahg337325 Galactose oxidase/kelch repeat superfamily protein
38.1838 Ahg951744
44.3058 Ahg487181 F-box family protein
45.607 Ahg481035 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression