Detail



ID : Ahg471318

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471318|fgenesh2_kg.1__1272__AT1G11770.1
Sequence
ATGAAGATCT TTTGTTTAAT TCTCTTCTTA ATCTCCTCCT CCATCTCCAC TTCTATTGCC GTCGAACCTC CCCCAGAAAC AATCTACCAA AACTTTCTCC AATGTTTCAC AAACCAAACA AAAGCTCCTC CTAACTCATT ATCCGACGTC GTTTTACCAA AAACCGCGGC AGCTTTCACC CCAGTCCTAC GCGCTTACAT CCGAAACGCG CGTTTCAATA CCACCGCGAC TCCGAAACCC GCGATTGTAA TCGCGGCTCG TTCCGAGAGC CACGTCCAAG CTGCCGTCAT CTGCACGAAA TCGCTAAACA TCCAACTGAA AACTCGAAGC GGTGGTCATG ACTACGAAGG TGTTTCCTAT GTCTCTCACG TTCCTTTCTT CGTCCTCGAC ATGTCCAATC TCCGTAACAT CACCGTCGAC CCGGCCACCG AGTCTGCATG GGTCGGAGCC GGTGCAACTC TTGGTGAGGT TTATTACAGG ATTTGGGAAA AAACCAAAAG TCATGGATTC CCCGCCGGAG TTTGTCCCAC GGTTGGAGCC GGAGGTCACA TTAGCGGTGG CGGTTACGGA AACATGATCC GAAAATACGG ACTTTCCGTT GATTACGTTA CCGACGCCAA AATCGTTGAC GTTAATGGAC GGGTTCTTGA TCGGAAAGGA ATGGGAGAAG ATTTGTTTTG GGCCATTAAC GGTGGAGGTG GTGCTAGCTT CGGTGTTATC CTAGCTTTCA AGATTAAACT CGTCCCTGTT CCACCGACCG TAACCGTTTT CAGAGTAGAG AAAAACTTGG ACGAAAATGC TATTGACATG GTTCATAAAT GGCAGTTTGT TGCACCCAAG ACCGATCCAG GTCTTTTCAT GAGGCTATTG TTACAGCCGG TGACTCGGAA TAAAAAACAA ACGGTTCGAG CATCGGTTGT GGCTCTGTTC TTGGGGAACC AAAACACTGT TATGTCTATG CTAACCAAAG ATTTCCCAGA GCTAGGTCTA AAGAAGGAGA ATTGCACGGA GATGACTTGG ATACAGTCGG TGATGTGGTG GGCGAACAAC GATAACGCCA CACAGATTAA ACCCGAGATT CTACTGGATC GAAACCCGGA CTCAGCATCT TTCGGGAAAA GGAAGTCTGA TTTCGTCGAG AAAGAGATCA CCAAAGAGGG GCTAGATTTC TTGTTCAAGA AGATGATTGA AGTTGGGAAG ATAGGTTTAG TGTTTAATCC TTATGGAGGG ATAATGAGCG AGGTGGCTAC AACGAAGACT CCATTCCCGC ACAGGAAGAA GCTTTACAAA ATCCAGCATT CGATGAACTG GAAAGATCCG GGAACCGAAG CGGAAACCAG TTTCTTGCAG AAGGCGAAAA GTTTCTATAG CTACATGGCT CCTTTCGTGA CCAAGAACCC TAGACACACT TATATCAATT ACAGGGATCT GGATATTGGA GTTAATACCC CTGGCCCAAA CAGTTACAGA GTAGCAGAGG TTTTCGGGAG GATGTATTTC GGAGAGAATT TTGATCGGTT GGTGAAAGTG AAAACTGCCG TGGATCCGCA AAACTTCTTC AGAGACGAAC AGAGTATACC TACCTTGCCT AGCAACCCAC CCAGACGTTA G 
Length1611
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4526801.. 4528408
Download Sequence
A.thaliana
AGI-codeAT1G11770.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg485821 alpha/beta-Hydrolases superfamily protein
12.7279 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
16.7929 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
18.4391 Ahg897443
20.6155 Ahg486726 VANGUARD 1 homolog 2
21.3542 Ahg924765 PA-domain containing subtilase family protein
21.8403 Ahg481434 Integrase-type DNA-binding superfamily protein
23.2594 Ahg338459 Tetratricopeptide repeat (TPR)-like superfamily protein
27.0555 Ahg351661 Heavy metal transport/detoxification superfamily protein
28.4253 Ahg358371 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression