| Annotation |
|---|
| Description | jgi|Araly1|339396|fgenesh1_pg.C_scaffold_2001495 |
| Sequence |
ATGGCTGCGG CGGTTGCATC TGGAATTGCC CCGACGACGG CCATGGTTGA TCAAGTTCCC AATCAACCGA CGGTTGCTGC TGCTCCTCCT CCTCCTTTCC CTGCCGTGAG TCAGATTGCG GCGGTTGCGG CTGCTGCTGC TGCCGCGGAG GCTTTGCAAA CGCATCCAAA CTCGTCTCTC TATGTCGGAG ATTTAGATCC GAGTGTCGAT GAGCCACAAC TGTTGGATCT CTTTAATCAA GTTGCTCCAG TTCAGACTGT TAGGGTTTGT CGTGATTTGA CTCGTCGTTC TCTTGGTTAC GCTTACGTCA ATTTCGCTAA CCCTGAAGAT GCGAGTCGTG CGATGGATAG TCTCAACTAT GCTCCGATCA GGGACAGGCC TATAAGGATC ATGCTCTCGA ATCGTGATCC GAGCACTCGA TTGAGTGGAA AAGGCAATGT TTTCATCAAA AACCTCGATC CATCGATCGA TAACAAAGCT TTGTATGAAA CATTCTCGGC TTTCGGGACT ATCCTCTCTT GCAAGGTTGC AATGGATGCG GTGGGACGTT CGAAAGGATA TGGCTTTGTC CAGTTTGAGA AAGAGGAAAC CGCTCAGGCT GCTATTGACA AGCTTAATGG CATGTTGCTT AATGATAAGC AAGTCTTTGT TGGCCATTTT GTTCGTCGTC AGGACAGGTC TCGTAGTGAG AGCGGTGCGG TGCCGCGTTT CACTAATGTT TATGTTAAGA ATCTTCCTAA GGAGATTACT GATGATGAGC TTAAGAAGAC TTTTGGGAAA TATGGAGATA TCTCTAGTGC GGTTGTGATG AAAGATCAGA GTGGGAACTC GAGGTCTTTC GGGTTTGTGA ACTTTGAGAG CCCTGAAGCT GCTGCCGTTG CGGTTGAAAA GATGAACGGT ATCAGCCTTG GGGAGGATGT GTTGTATGTT GGGAGGGCAC AGAAGAAGTC TGAGAGGGAA GAGGAATTGA GGAGAAAGTT TGAGCAAGAG AGGATAAGCA GGTTTGAGAA ATTACAAGGA TCAAATCTGT ATTTGAAGAA CCTTGATGAT AGCGTGAATG ATGAGAAGCT CAAGGAGATG TTCTCTGAGT ATGGGAACGT GACCTCCTGC AAGGTTATGA TGAATTCACA AGGTTTGAGC AGAGGCTTTG GTTTTGTTGC TTACTCCAGT CCTGAAGAAG CTTCGAGAGC TTTGAGTGAA ATGAATGGGA AGATGATAGG AAGGAAACCT CTTTACGTTG CTTTTGCTCA ACGCAAAGAA GAAAGACGGG CTCACCTTCA GACTCTATTT ACTCATATCA GATCACCTGG GACAATGTCG CCAATTCCAT CACCAATGCC TGGGTTCCAT CATCACCCAC CAGGAGGGCC AATGTCAGGA CCACACCACC CAACAATGTA CATAGGTCAG AATGGTCAAG GTCTGGTACC CCCACAACCT ATGGGGTATG GGTACCAAGT TCAGTTCATG CCCGGGGTGC GTCCAGGTGC AGGCCCGGCT AACTACATGA TGCCTTTCCC TCTTCAAAGG CAAACTCAGC CTGGTCCTCG TGTTGGGTTC AGGCGTGGTG CTAATAACAT GCAGCAGCAC TTCCAACAAC AACAAATTCT GCAGCAAAAT GCAAGCCCGG GAATGCGATA CATGGGAGGC GCAGGCAACA GGAGGAATGG AATGGAAGCA TCTGCTCCAC AAGGCATCAT CCCTTTGCCA TTGAATGCGT CTGCAATCTC TCACAATGCT CCTCAACACC CGCATAAGCC ACCTCTCCTC ACCATTTCCA AGCTTGCATC TGATTTGGCT TTGGCTCCCC CGGAGAAACA CCCACAGATG CTTGGGGAGA ACCTTTACCC ACTTGTGGCG CAGCAGGAGC CAGAATATGC GGCCAAAGTT ACTGGGATGT TGCTGGAGAT GGATCAAGCT GAGATTTTGC ACCTTCTTGA GTCACCTGAA GCTCTTAAGG CTAAAGTTTC CGAGGCTCTG GATGTTCTCA GACTCTCTGC TAATGCACCA GCTGTGTCAT CTGTTGATGA CCAGTTTGCT CTATCCTCAA CCGAGTGA |
| Length | 2058 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 14147138.. 14149792 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G71770.1 |
| Description | poly(A)-binding protein 5 |
| TAIR curator summary | Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro. |
| Alias | [PAB5][poly(A)-binding protein 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.9642 |
Ahg890578 | HSP20-like chaperone |
| 26.8328 |
Ahg942510 | transposable element gene |
| 29.3598 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 30.4631 |
Ahg896275 | |
| 39.1791 |
Ahg931324 | |
| 45.7602 |
Ahg942130 | Leucine-rich repeat (LRR) family protein |
| 46.0869 |
Ahg931779 | glycine-rich protein 2B |
| 50.4381 |
Ahg346008 | Actin-like ATPase superfamily protein |
| 55.857 |
Ahg942303 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 56.4978 |
Ahg477013 | Terpenoid cyclases family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|