| Annotation |
|---|
| Description | jgi|Araly1|340086|fgenesh1_pg.C_scaffold_2002185 |
| Sequence |
ATGGCGAAGA AAGCTGTGTT GATTGGAATC AATTACCCTG GGACCAAGGC GGAGCTACGG GGCTGCGTCA ACGATGTCCG GAGGGTGCAC AAATGTCTCG TCGATCGGTT TGGATTCTCC GAGAGAAACA TCACTGAGCT GATTGACACT GACGACTCTT CCACCAAACC TACAGGGAAG AATATTCGAA GGGCGTTGTT GAATCTAGTT GAGTCTGCTA AATCCGGCGA TGTTCTTGTC GTCCATTACA GTGGACACGG GACGAGGTTG CCGGCGGAGA CTGGAGAAGA CGATGATACT GGATATGATG AGTGTATTGT TCCTTGTGAT ATGAATCTTA TCACCGATGA TGAGTTCAGA GATCTTGTGG ACAAGGTACC AAAGGAAGCA CACATTACAA TCATCTCAGA CTCTTGTCAC AGTGGTGGTC TCATCGATGA AGCTAAAGAA CAGATAGGAG AGAGCACGAA GAAGAAGCCA AAGAAAAAAT CTGAAGGCTC TTCAGGACTT GGAATCAAAG GCTTTGCGCG TGAAGCTGTG GAAGAAGCAT TGGAAACTCG AGTGATCCAC ATTCCTCACC ACAAAGATGA GAAAGAAAAA AACAAGACTA AAGAGATTGA ACTAGAAGAT GGTGCAAAAG TCCATGTCGT AAACAAATCT CTGCCTCTAC AAACTCTAAT CGATATCCTC AAGCAAAAAA CAGGTAACGA TAAAATCAAA GTAGGGGAAA TCAGACCAAC CCTTTTCAAT GTGTTTGGAG ACGATGCATC CCCAAAGGTT AAGAAGTTCA TGAAAGTGAT TCTAACAAAG ATGCAAGAAG GTAAAACTGA AGGTGGGGTA TTGGGAATGT TTGGGAAACT AGCTCAAGAG TTTCTTGAGC ATAAACTAAA CGATGATGAA GAGTATGTGA AACCCGCGAT GCAGACACAT GTTGGGAACA AGCAAGAGGT CTATGCAGGT GCGAGCAATG GTTCTCTTGC GGATAATGGT GTTTTGATTA GTGGTTGCCA AACAGATCAA ACTTCTGCAG ACGCGAGTCC TCAAGGTCAT CCTGAAATGG CTTATGGAGC CTTCACCAAT GTTGTGCAGA TCATACTCGA GGAGACAAAG GGTAAGATTA CATACAAAGA ACTTGTTTGA |
| Length | 1140 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17554162.. 17556219 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79330.1 |
| Description | metacaspase 5 |
| TAIR curator summary | Metacaspase AtMCPb2/AMC6. Caspase family protein. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain. |
| Alias | [AMC6][ATMC5][ATMCP2b][MC5][MCP2b][metacaspase 5][metacaspase 2b] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.4164 |
Ahg486591 | low-molecular-weight cysteine-rich 53 |
| 14.4568 |
Ahg932265 | Defensin-like (DEFL) family protein |
| 30.5614 |
Ahg901667 | ubiquitin-protein ligases |
| 43.0233 |
Ahg941764 | WRKY DNA-binding protein 38 |
| 44.6318 |
Ahg313705 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 45.2548 |
Ahg319113 | Translation initiation factor IF6 |
| 47.1805 |
Ahg912339 | FBD, F-box and Leucine Rich Repeat domains containing protein |
| 48.1664 |
Ahg952154 | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| 49.1121 |
Ahg917031 | |
| 50.2991 |
Ahg484466 | Plant self-incompatibility protein S1 family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|