Detail



ID : Ahg341207

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|341207|fgenesh1_pg.C_scaffold_3000970
Sequence
ATGTCCTCCC CGTACGGCAA AGTCGACGAG CATGAACACG TAAGGCTCCA AGCTCGTCGT AAGACGAGAA AGAACATCGC AATAATCGCT GTATCACTCG TCATTCTCGC CGGAATCGTG ATCGGAGCCG TGTTTGGAAC CATGGCTCAC AAGAAGTCAT CAGAGACAGT GGAGACTAAT AACAACGGAG ACTCAATCTC CGTTTCCGTT AAAGCCGTTT GCGACGTTAC GTTGCATAAA GACAAATGCT TCGAAACCCT CGGATCAGCT CCAAACGCAA GCAGTCTTAA TCCAGAAGAG CTCTTCAAAT ACGCAGTCAA AATCACAATC ACCGAAGTTT CAAAAGCTCT CAACGCTTTC TCCTCATCCT TAGGCGATGA AAAGAACAAC ATCACCATGA ACGCTTGCGC TGAGCTTCTT GACCTAACGA TAGATAACCT CAACAACACG TTAACGTCAT CAGCAAACGG TGGTGTCACG GTTCCTGAGC TAGTTGATGA CCTACGTACA TGGCTGAGCT CAGCCGAGAC GTATCAAGAA ACGTGCGTGG AAACGTTGGC TCCAGATATG AAGCCGTTCG GAGAAAGTCA TCTCAAGAAC TCAACGGAGC TGACGAGTAA CGCACTAGCG ATCATCACAT GGCTCGGAAA GATCGCTGAC TCGTTCAAAC TCCGGAGGCG TTTGTTGACT ACGGTTGACG TGGAGGTGGA CGTCCATGCG GGCAGGAGAT TGTTGCAGAG CACGGATTTG AGGAAAGTGG CGGATATTGT GGTGGCTAAG GATGGTTCGG GGAAGTATAG AACGATAAGT AGGGCTTTAG AGGATGTGCC TGAGAAGAGT GAGAAGAGGA CGATTATATA TGTGAAGAAA GGAGTTTATT TTGAGAATGT GAAGGTGGAG AAAAAGATGT GGAATGTTGT TGTGGTTGGA GATGGAGAGA GCAAGAGTAT TGTCTCTGGC AGACTTAATG TCATCGATGG AACTCCCACT TTTAAGACTG CCACATTCGC TGTGTTCGGA AAAGGGTTTA TGGCAAGAGA CATGGGCTTC ATCAACACAG CTGGTCCATC CAAACACCAA GCCGTAGCGC TAATGGTAAG CGCGGATCTC GCCGCCTTTT ACCGTTGTAC AATGAACGCA TACCAAGACA CGCTTTACGT GCACGCTCAA CGCCAATTCT ACCGTGACTG CACCATTATG GGAACAGTCG ATTTCATCTT CGGTAACTCA GCTTCAGTTC TCCAAAACTG CCGGATTCTC CCTCGCCGAC CAATGAAAGG ACAACAAAAC ACAATCACGG CTCAAGGACG TACTGATCCG AACATGAACA CAGGAATCTC AATTCACCGT TGTAACATCT CTCCGCTCGG TGACCTAACC GATGTTAAGA CGTTTTTAGG TCGACCATGG AAGAATTTCT CGACGACAGT GATAATGGAC TCGTATTTGC ATGGGTTTGT TGACCGGAAA GGTTGGTTAC CGTGGACCGG AGATTCGGCG CCGGATACTA TATTTTACGG TGAGTATAAG AATACCGGCG CTGGTGCGTC GACAAAGAAT AGAGTTAAGT GGAAGGGATT GCGGTTTCTT TATACGAAGG AAGCGAATAG GTTTACCGTG AAAGCTTTCA TCGACGGAGG AAGATGGCTT CCGGCCACGA AAGTGCCGTT CAGGTCCGGT CTCTGA 
Length1686
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4039649.. 4041823
Download Sequence
A.thaliana
AGI-codeAT3G10710.1
Descriptionroot hair specific 12
TAIR curator summary
Alias[RHS12][root hair specific 12]
Gene coexpression
MR
MR Locus Description
7.4162 Ahg478949 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
8.24621 Ahg949012
8.48528 Ahg893698 WUSCHEL related homeobox 12
21.0238 Ahg947990
23.388 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
23.4521 Ahg917822 nitrate transporter 2.4
26.1151 Ahg340977 Translation initiation factor IF2/IF5
31.225 Ahg887895
36.3043 Ahg932563
38.8844 Ahg904679
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression