Detail



ID : Ahg904679

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904679|Al_scaffold_0003_1807
Sequence
ATGGTGAAGG AGTCCCAGAA AATCGTGGCC CTAGATCAAG ACATACCCGT GATAGACATG TCCCAAGAGA GGTTACGAGT GTCCATGCAG ATAGTTAAAG CTTGCGAGTC CATTGGTTTC TTCAAAGTGG TCAACCACGG CGTTGACCCG GACGTTATCT CCCGGATGGA GCAAGAGTCC ATAAACTTCT TCGCTAAACC GGTTCTTGAG AAGAAATCTG TCGGACCGGT GGTGAACCGG CCTTTTGGCT ATGGGTTGAA GGACATTGGG CTCAAGGGTG ATATTGGGGA GGTCGAGTAT TTGCTCCTTC ACACTAATCC TCTCTTCCTT TCTCAGTTAT CGTCTGGGAA CGATTCTACC AAGTTCGGCT CCGCAGTGAC TTGTTACGTA GAAGCAGTTA AGCAGTTGGC GTGTGAGATC TTAGATCTCA CGGCTGAAGG ACTTCGGCTC CCACCTCATA CCTTCAGCAA ATTAATCAGA GCCGTTGATA GCGACTCAGT TCTTAGGTTT AATCACTACC CATCGTCCGA TCAATTTCTT AGTGGAGCCA ACCTCTCTGA TAAGTCTGTG TCATTACCGA GAGTTGGCTT CGGGGAGCAC ACAGACCCTC AGATCTTGAC AGTTCTCAGA TCCAACGGAG TAGGGGGCCT CCAGGTGGCA TTCCCTGACG GAAGATGGGT CTCTGTCTCT CCTGACCCTT CTGCTTTTTG CGTAAACGTA GGCGATCTTT TGCAGGTAAT GACGAATGGG AGATTCCTAA GCGTACGACA CAGGGCGGTG ACTACAGGAC ATGCAAGCAG GTTATCGATG GCATACTTTG CCGGTCCGTC CGTCCATGCA AAGATAGGCC CTCTCCCGAC AATCGTCACG GCGGCAGATC AGCCACGGCT TTACCGGACG TTCACATGGG CTGACTACAA GAAGTTTGCT TACTCACTAG GCCTTGGAGA TAACCGTCTT GACATTTTCC GCTCACGTGT CGATGAGGAA GATGAGTTGG GCTTCTAG 
Length1008
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6908893.. 6911143
Download Sequence
A.thaliana
AGI-codeAT3G17203.1
Description
TAIR curator summarya pseudogene initially named GA2ox5 and thought to be a member of the gibberellin 2-oxidase enzyme family. It was later shown to have a large DNA insert in the putative gene model.
Alias[GA2OX5][gibberellin 2-oxidase 5]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
7 Ahg343514 polyol/monosaccharide transporter 1
9.21954 Ahg935362
11.5758 Ahg337040
11.6189 Ahg900325 myb domain protein 81
12.8452 Ahg913800
14.8324 Ahg347138 alternative oxidase 1C
18 Ahg474778
19.1833 Ahg497075 transposable element gene
21.3073 Ahg470227
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression