Detail


ID : Ahg341215

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|341215|fgenesh1_pg.C_scaffold_3000978
Sequence
ATGGAGCAGC TTAAGGTGAA AAAGACAATC GGTAACACTT CAAAACGTGT TACAAGGTCC CAAACTTACC CCTTCGAAGG AATAATGCCT CTGAATCTGA AAGAGGAGAT TCTCATGAAA TTGAAGGCCA AAACCATATC GAAGCTGATC CTCCTTTCGA AGTCATGGTC ATCGATAGTC CTTAACAAAG ATTTCACCAA CATATACCTG ACTCAATCTT TGGCTCGACC ACGTCTTCTT TTCTCAATCT ACAATCTTGA CATAGATGTG CATTTCTTCC ACTCTTGCTC TCAAGAGGAT CCATCTTCTG ATCATCAAAG GGTTAGGTGT TACCCTGATT CGAATTCGGC TAGCTGGTAT GACTATTCTC CACCTGTCCG TGGCTTGATC TGCTGTCTAG AAAATCTATA TACTAAAGTG GTAATTGGAA ATCCTACTAC TTGTCAATTT GTAACTTTAC CTAGAGTCAG AACTAAGAAG AAAGACATAT TCCCAGACAT ATTCCCCTTT TTGGGATATG ATCCTGTTAA GGATGAATAC AAAGTCTTGT GCATGACGAT AGCAGCCAAT CATAAAGGAA ATGTTGTGTC CAAGGAACAT CAAGTTTTCA CTCTAGGAGG TAAAAAGAAG AAATGGAGAA TGATCGATTG TGAGATTAAT CATTATCTTC CTCCTAGAAC TAAAGGGATA TGTAGCAATG GGGTTGTGTA TTATCTAGCT ATGGTCAACC ATGTTCAGTC TCTAATGTGC TTTGATGTGG GGTCTGAAAA GTTTAGTGTC GTTAAGTTAC CGGGGAAGGT CGGAATTCTA GCGAAGTACG GCGAAAAGAT AGCTGTAACG AATTTGTTAT TTGACTGTAT ACGACTTGAC GTTTGGATTC TAGAAGATGC CAGCAAACAA GAATGGTCAA ATATTTATGT CTTGGTTCCT TCTTGTGTAT ATCGACCATT CAGCTTCAGG GGTATACTTG GTACCGGCGA GCTTTTATTT GCACCGGAAC CTACGTCTTT TTATTTACTA TGTTACGATC TCAAGGAACA CAAAGCTAGA AAAATCTGGA TCAAAGGACT TGGAGATTAT ACTAATATTG AAGTCTTTTT GGATCATGTA GAAAATCCTA TGGTTCTGTC AAAGATAAGC TTCGGTTTTC TTATTTGA
Length1158
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4080171.. 4081565
Download Sequence
A.thaliana
AGI-codeAT3G10790.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.23607 Ahg894574
9.94987 Ahg495114 nuclear factor Y, subunit C6
10.3923 Ahg937113
13.4164 Ahg948902 transposable element gene
18.6548 Ahg936587 ATP-dependent protease La (LON) domain protein
27.0924 Ahg473040 AP2/B3-like transcriptional factor family protein
29.3939 Ahg495460 F-box/RNI-like/FBD-like domains-containing protein
30.0333 Ahg914005 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
30.3315 Ahg937702
33.1662 Ahg901208
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression