Detail



ID : Ahg473040

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473040|fgenesh2_kg.1__2994__AT1G28300.1
Sequence
TCTCTCTCTC TCTCTCTCCC TGAAAAATGG ATAACTTCTT GCCCTTTTCC TCTTCTAACG CAAACTCTGT CCAAGAACTC TCTATGGATC TTAACAACAA TCGTTCGCAC TTCACAACGG TCCCTACTTA TGATCACCTG GCTCAGCCTC ATCACTTGAT GCCGCCTTAT TCATACCCGG TGGAGCAGAT GACGGCGGTG ACGAATCCGC AGCCGGTTTA CTTCTCGGAG GGTTATCCTC AGATCCCGGT TACGAAAACC GGAAGTGAAT TCGGTTCTCT GGTTGGTAAT CCTTGTTTGA GGCAAGAGAG AGGTGGTTTT CTTGATCCGC GTATGACGAA GATGGCAAGG ATCAACAGAA AGAACGCGAT GATCAGATCA AGAAACAACT CTAGCCCTAA TTCCAGTCCA AGTGAGTTGG TTGATTCAAA GAGACAGGTG ATGATGCTTA ACTTGAAAAA TAACGTGCAG ATCTCCGACA AAAAAGATAG CTACCAACAG TCCACATTTG ATAACAAGAA GCTTAGGGTT TTGTGTGAGA AGGAATTGAA GAACAGCGAT GTTGGGTCAC TCGGGAGGAT AGTTTTACCA AAGAGAGATG CAGAAGCAAA TCTTCCGAAG TTATCTGATA AAGAAGGAAT CGTTCTAGAG ATGAGAGATG TTTTCTCTAT GCAGTCTTGG TCTTTCAAAT ACAAGTTTTG GTCCAATAAC AAGAGCAGAA TGTATGTCCT CGAGAACACA GGAGAATTTG TGAAGCAAAA TGGAGCAGAG ATGGGAGACT TTTTAACAAT ATACGAGGAC GAAAGCAAGA ATCTCTACTT CGCCATTAAT GGGAATTCGG GAAAACAAAA TGAAGGAAGA GAAAATGAGT CGAGGGAAAG AAACCACTAC GAAGACACAA TGCTTGATTA CATATCAAGA GACGAAGAGG AAGCTTCCAT TGCAATGCTC ATCGGAAATC TAAATGATCA CTATCCCATC CCTAACGATC TCATGGACCT CGCCACTGAT CTTCAGTACC ATCAAGCCAC GTCCTCAGTG CCACCTGAGG ATCACGCGTA CATGGGTTCG TCCGATGATC AAGTGAGCTT TAACGACTTT GAGTGGTGGT GATATGGTGG AAGTTCTCAA GTTCATATAG CTACCCCCTT ATGAAAATAG ACCTTAAGAT ATACAAGAGA GATTAAAAGA AAAAGATAGT ATATTTCATC GTATCCGAGA TATTCAACAT GAGATTCATA TCTATAATTG CTTTATAGAG TGTTTTTATT AATTATCAAT GTATTAAAGT TTT 
Length1293
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11837152.. 11840240
Download Sequence
A.thaliana
AGI-codeAT1G28300.1
DescriptionAP2/B3-like transcriptional factor family protein
TAIR curator summaryTranscription factor that contains a B3 domain, a DNA-binding motif unique to plants and characteristic of several transcription factors. Plays critical roles both early and late during embryo development. LEC2 RNA accumulates primarily during seed development. LEC2 is required for the maintenance of suspensor morphology, specification of cotyledon identity, progression through the maturation phase, and suppression of premature germination. It establishes a cellular environment sufficient to initiate embryo development - ectopic, postembryonic expression of LEC2 in transgenic plants induces the formation of somatic embryos and other organ-like structures and often confers embryonic characteristics to seedlings and to reproductive and vegetative organs of mature plants.
Alias[LEC2][LEAFY COTYLEDON 2]
Gene coexpression
MR
MR Locus Description
15.8114 Ahg923668 Galactose oxidase/kelch repeat superfamily protein
17.2047 Ahg909166 BEL1-like homeodomain 11
20.9762 Ahg326528
25.3377 Ahg474052
25.3969 Ahg936611 P-glycoprotein 17
27.0924 Ahg341215 F-box associated ubiquitination effector family protein
36.2215 Ahg354612 gibberellin 3-oxidase 3
41.7493 Ahg947825
44.3621 Ahg925684 RPM1 interacting protein 4
48.9898 Ahg917676 WUSCHEL related homeobox 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression