Detail



ID : Ahg341690

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|341690|fgenesh1_pg.C_scaffold_3001453
Sequence
ATGTCTGGAA AAGGAGCGAA AGGACTGATA ATGGGGAAAC CCAACAGCAA AGACAAGGAC AAGGACAAGA AGAAACCAAC CACTCGCTCT TCTCGTGCTG GTCTCCAGTT TCCAGTGGGA AGAATCCATA GACTGTTGAA AGGTAGGTCA ACTGCTCATG GACGTGTTGG AGCAACTGCT GCGGTTTACA CTGCTGCTAT ATTGGAGTAT CTGACTGCAG AAGTCTTGGA GCTGGCTGGT AATGCGAGCA AGGATCTGAA AGTGAAGCGT ATTACACCAA GGCACTTGCA GCTCGCTATT CGTGGTGACG AGGAGCTCGA TACTCTCATC AAAGGAACTA TTGCTGGTGG TGGAGTCATT CCTCACATTC ACAAGTCTCT CATCAACAAA TCTGGCAAAG AATAA 
Length405
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6223857.. 6224552
Download Sequence
A.thaliana
AGI-codeAT1G52740.1
Descriptionhistone H2A protein 9
TAIR curator summaryEncodes HTA9, a histone H2A protein.
Alias[HTA9][histone H2A protein 9]
Gene coexpression
MR
MR Locus Description
2 Ahg890272
10.5357 Ahg324310 TRAF-like family protein
16.9706 Ahg952500 DNA repair-recombination protein (RAD50)
19.8997 Ahg893821 RNA-binding (RRM/RBD/RNP motifs) family protein
21.9089 Ahg355724
32.7872 Ahg909999 GTP binding Elongation factor Tu family protein
41.4729 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
49.2341 Ahg318827 topoisomerase 6 subunit B
50.6952 Ahg471666 RING/FYVE/PHD zinc finger superfamily protein
53.1789 Ahg480240 Minichromosome maintenance (MCM2/3/5) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression