Detail



ID : Ahg341904

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|341904|fgenesh1_pg.C_scaffold_3001667
Sequence
ATGGCTTCCT CGACCGAGAA CGACGAGTTT CCCATTCTTC CAATTCCAAA AGCAACACCT CGTGCTCACA CTAGGGCTTT TACTTCCAGG AACCGTAGTG TTTCTCTCTC AAACCCAACT TTCTCCTTTG ACGGATTTGA CAGCTCGAGT GTGGTTTTAG GTTACACAGG TCCTCTTCGA ACCCAGCGAA TAAGACCTCC TTTAGTGCAA ATGAGTGGTC CTCTTCACTC TACTCGCAGA ACAGAACCTC TCTTCTCTCC TTCTCCTCAA GAACCTCCTG ATTCCTCCTC CTCCTCTACC GTTAATGTTC CACCTGAAGA TGATTTTGTC TTCCAAAACG CAAATCTCTT GAGATCTGGA CAGTTAGGGA TGTGCAATGA TCCTTACTGC ACTACTTGCC CTTCTTACTA CAACCGCCAA GCTGCTCAAT TTCACACTTC CAGAGTTTCT ACCTCTAGGT TTCGCACTGT TCTGTATGAT GATGCTAGAG GTTGGGCTAA GCGATTTGCC TCCTCTGTTC GTAGATGCTT ACCTGGAATA ATGAATCCTC ATTCCAAATT CGTTCAAGTC TGGACTAGAG TCTTAGCCTT TTCAAGCTTA GTGGCCATTT TTATAGATCC TCTCTTCTTG TTCCTCTTAT TTATCCAACA AGACAACAAA TGCTTAGCGA TTGATTGGCG TGCGACTAAA GTATTGGTGT CTCTTAGAAG TATAACGGAT CTTGTATTCT ACATTAACAT TCTACTTCAG TTTAGGTTGG CCTATGTAGC CCCTGAATCT AGAATAGTTG GTGCCGGCCA GTTAGTTGAT CATCCAAGAA AAATTGCTCG CCATTACTTC CAAGGAAAGT TTTTTCTTGA TCTGTTCATA GTGTTACCCA TTCCACAGAT AATGATATTA TGGATAATAC CAGCACACTT GGGCACACGC AGGGAAGAAT ATGAGAAACA GATTATACGC GCTACGGTTC TTTTTCAATA CATTCCAAAG TTATATAGAC TCTTACCTCT TCTTGCTGGA CAAACACCGA CCGGCTTCAT ATTTGAGTCA GCCTGGGCTA ATTTTGTTAT TAATCTTCTC ACCTTCATGC TTGCTGGTCA CGCTGTTGGC TCTTGCTGGT ATCTTTCTGG TCTGCAGAGA GTTAAGAAAT GCATGCTGAA TGCTTGGAAT ATTTCTGTGG ATGAACGTAG AAATCTTATC GATTGTTCGC GTGGAAGTTA TGCATCCGAG TCACAACGAG CTCTCTGGAG AGATGGTGCT AGTGTCAATG CTTGTTTTCA AGAGAGTGGT TTTACTTATG GGATCTATCT GAAGGCAGTG AATCTTACCA ATCAATCTAG TTTCTTCACA AGATACAGTT ATTCTCTGTT TTGGGGATTC CAACAAATAA GCACACTTGC TGGAAACTTA TCCCCAAGTT ACTCAGTGGG GGAGGTTTTC TTTACAATGG GTATCATTGG ACTAGGGCTT TTGCTTTTTG TGCGGCTTAT CGGTAATATG CAGAACTTCC TTCAATCTCT TGATCGGAGG AGGATGGAAA TGATGCTGAG ACGGCGTGAT GTAGAGCAGT GGATGAGCCA TAGACTGTTG CCAGAAGATA TAAGAAAAAG AGTGCGCGAG GCTGAGCGGT ACAATTGGGC TGCGACTAGA GGAGTTAACG AAGAATTTCT ATTCGAGAAT ATGCCTGATG ACCTTCAAAG AGATATAAGA CGACACCTCT TTAAATTTCT CAAGAAGGTG AGAATATTTT CGTTGATGGA TGAATCAGTT TTAGATTCAA TCCGTGAGAG GTTGAAACAG AGGACATACA TAAGGTGTAG CACGGTGTTG CACCGCAGAG GTCTAGTAGA AAAAATGGTA TTCATAGTGA GAGGTGAGAT GGAGAGTATT GGAGAAGACG GTTCTATTCT TCCTTTATCA GAAGGCGACG TTTGTGGTGA AGAACTCCTC ACTTGGTGCC TCGAACGCTC TTCTATAAAC CCCGATGGGA CTAAGATAAA GATGCCAACA AAGGGATTAG TTAGCAACAG AAATGTTAGG TGTGTAACAA ATGTGGAGGC GTTTTCGCTG AGTGTAGCAG ATCTTGAAGA TGTAACAAGC TTGTTTTCAA GATTCTTAAG GAGTCATCGA GTGCAAGGAG CTATAAGGTA CGAGTCTCCT TATTGGAGAC TACAAGCAGC GATGCAGATT CAAGTGGCTT GGAGATACCG AAAGAGACGA CTTCAGAGAT TTTACACTGC TCAGTCTAGT TCCAACAATT AG 
Length2262
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7103088.. 7115477
Download Sequence
A.thaliana
AGI-codeAT3G17690.1
Descriptioncyclic nucleotide gated channel 19
TAIR curator summarymember of Cyclic nucleotide gated channel family
Alias[ATCNGC19][CNGC19][CYCLIC NUCLEOTIDE-GATED CHANNEL 19][cyclic nucleotide gated channel 19]
Gene coexpression
MR
MR Locus Description
33.4664 Ahg482040 Plant protein of unknown function (DUF828)
34.0734 Ahg938381 Proline-rich extensin-like family protein
72.8011 Ahg897300 Protein of unknown function (DUF2921)
74.4043 Ahg323992 hydroxyproline-rich glycoprotein
82.9759 Ahg342636 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression