Detail



ID : Ahg343220

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|343220|fgenesh1_pg.C_scaffold_3002983
Sequence
ATGCTAGAGA AGAAGGAGAA TGTTCTTCTC AAGAAAGCTG CTGGAGAGGT TGAGAAAGCT AAGGAATTCT CCCGGGTGAA GAACAAACGA GCGGCTATAC AATGTTTGAA AAGGAAGAGG TTATATGAGC AACAAGTTGA ACAGCTTGGG AATTTCCAGC TCCGTATTCA TGATCAGATG ATTATGTTAG AAGGTGCGAA AGCAACAACA GAGACTGTAG ATGCTTTGAG GACTGGAGCT TCTGCAATGA AAGCTATGCA GAAAGCAACA AACATTGATG ATGTTGACAA GACAATGGAT GAGATCAACG AGCAAACTGA GAACATGAAA CAGATCCAAG AAGCATTGTC GGCTCCATTT GGAACAGCTG CTGATTTTGA TGAGGATGAA TTGGAAGCAG AACTTGAAGA ACTAGAAGGC GCCGAGCTAG AAGAGCAACT TCTTCAGCCT GTTCCAATCC ATGTGCCTCA AGGAAACAAA CCTAATCGTG CTCCAGCTCA AAAGCAACCT ACTGCTGAGG AAGATGAACT CGCTGCCTTA CAAGCTGAGA TGGCTCTCTA A 
Length561
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19689324.. 19690311
Download Sequence
A.thaliana
AGI-codeAT2G19830.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[SNF7.2][VPS32]
Gene coexpression
MR
MR Locus Description
9.94987 Ahg493844 ubiquitin conjugating enzyme 4
25.4951 Ahg911775 Transducin/WD40 repeat-like superfamily protein
28.9828 Ahg488679
30.0832 Ahg939877 Duplicated homeodomain-like superfamily protein
32.6343 Ahg490498 shaggy-like protein kinase 32
33.8821 Ahg950909 Major facilitator superfamily protein
33.9411 Ahg474712 HNH endonuclease
36.4143 Ahg472467 phytochrome-associated protein phosphatase type 2C
40.9145 Ahg926777 Phosphoribulokinase / Uridine kinase family
44.2267 Ahg496651 Octicosapeptide/Phox/Bem1p family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression