| Annotation |
|---|
| Description | jgi|Araly1|472467|fgenesh2_kg.1__2421__AT1G22280.1 |
| Sequence |
ATTCGCGGAG GAAAAAGACA TAAACGAAAA GAGAGCGAAG ACTTTCGTCG CAGAGACTTT GTGGATTTAT CGTTGAGTAC CTCAAAAAAA TTGAAACCAA ATTAGGGTTT TTATTTTGCA GATTGTTTTG TTTATTTGAA TAAATCTGCG CAAGTTTGAA TTAGGTTGCA AAAATCGAAG AAAATATCTT CGATTCAAAA AAATGGGAAA ATTTTGTTGC TTCACTTCCG CTTCTGAGGT TGTGGGAGGA CAATCATCAT CTCGATCAGG TAAAGGAAGA AGTGATGAAG GGATGATCAA GTATGGCTTT AGTCTAGTGA AAGGGAAAGC TAATCATCCC ATGGAAGATT ATCATGTTGC TAACTTTATC AACATTCAAG ACCATGAATT GGGGCTTTTT GCTATTTATG ATGGTCATAT GGGTGATAGT GTCCCTGCTT ACTTGCAGAA ACGCCTCTTC TCCAATATCC TTAAGGAGGG AGAGTTCTGG GTTGATCCTC GAAGGTCTAT TGCAAAAGCT TATGAGAAGA CGGACCAGGC GATTCTATCA AATAGTTCTG ACTTGGGTCG TGGCGGGTCT ACAGCTGTGA CTGCTATATT GATTAATGGG AGAAAGTTGT GGATAGCCAA TGTTGGGGAT TCACGAGCAG TTCTTTCTCA AGGTGGCACA ATAACGCAGA TGAGTACAGA TCATGAGCCT CGTACTGAAA GGTCGAGCAT TGAAGATAGA GGTGGATTTG TATCCAATCT ACCAGGTGAT GTTCCTCGGG TGAATGGTCA ATTAGCTGTG AGTCGTGCTT TTGGAGATAA GGGACTTAAG ACACACCTGA GTTCAGAACC TGACATAAAA GAAGCTATTG TAGATAGCCA GACAGATGTT CTTCTTTTGG CCAGTGATGG CATTTGGAAG GTAATGACAA ATGAAGAGGC AATGGAGATA GCTAGAAAAG TGAAAGATCC ACAGAAAGCA GCAAAGGAAT TAACAGCTGA AGCATTGAGA AGAGAGAGTA AAGACGACAT ATCTTGTGTC GTAGTCCGAT TCAGATGACA AACTCTGAAG GGGGATGGAT CATTTACGAG GAGATAATAA ACCAGCATTT TCAATCAAAG ATTCATCAGG ACAAAAAAGC TTGTTTTTCA CAGGATTCGA CTCAGATGAT TCTGGTCCGG TCGATTTGTG ATAGCCGCTT CTTGCTATAG CTTATGTGCG TTCGTTGTGT AAATTGTGTG TTTTAAAAGA CGACAAGAAT ATGAACAAAA AAGGTGATGG GGGATTTGTG TTATTATAAT TGGTTGATTT GTTATATTTA ATCATCGAGA TATAAATATT AGGATGTTTT TAAGTTATGT GAAAGTACTT TTGGATTAGG TTTGCATATA TAT |
| Length | 1383 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9329334.. 9331452 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G22280.3 |
| Description | phytochrome-associated protein phosphatase type 2C |
| TAIR curator summary | Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus. |
| Alias | [PAPP2C][phytochrome-associated protein phosphatase type 2C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg935612 | cyclic nucleotide-gated channel 12 |
| 6 |
Ahg935374 | RING/U-box superfamily protein |
| 8.3666 |
Ahg947663 | lysine histidine transporter 1 |
| 8.3666 |
Ahg939889 | calcium dependent protein kinase 1 |
| 8.77496 |
Ahg947166 | ENTH/ANTH/VHS superfamily protein |
| 9.16515 |
Ahg924051 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 11.4018 |
Ahg950719 | exocyst subunit exo70 family protein H7 |
| 12.1244 |
Ahg922633 | SH3 domain-containing protein |
| 12.49 |
Ahg483453 | glyoxalase 2-1 |
| 12.9615 |
Ahg938412 | plant U-box 14 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|