Detail



ID : Ahg343760

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|343760|fgenesh1_pg.C_scaffold_4000102
Sequence
ATGTTTGAAA ACAATCCGGA TGATCGTCCC TTGTTTCTCG CAACGGCGAG CTATGATCAT ACCATTCGAT TATGGGAAGC CCGAACCGGT ACCTGTTACC TTTCTTTTGC CTATCCTGAT ATGCATGTGA ATAGGCTTGA GATAACCCCT GATAAGGGTA AACTTGTAGC AGCTTGCAAT CCTCACATAC GACTCTTTGA TCTCAATTCC ATGGCCCCTC ATTTACCTGT GAGGACTTTT GAATCACACA CCAACAATGT TATGGCAGTA GGATTCCAAT ATACTGGACA AATGATGTAT TCAGGATCAG AAGATGGCAC AGTTAAGATC TGGGACTTGA GCTCAATGCT AGTTTTGATT TCCATGATCT TAACAACAAA TTGTCGACCC GAAAAATGCA GGGTTCGAGA ATGCCAAAGG GAGTTTAGAA GTGTTTCACC AATTAACACA GTCGTTTTAC ACCCAAATCA GACTGAATTG ATATCTGGTG ACCAAAACGG AAATATACGT GTGTGGGATC TCAGAGCAGA TTTGTGTAGC TGTGAACTGG TACCAGAAGT TGGTACACCT ATACGGTCTT TAACGGTTAT GTGGGATGGG ACAATGGTGG TTGCTGCTAA CGAACGTGGA ACATGTTATG TATGGCGCTC TTTGCAAGGA ATACAAACGA TGACGGAGTT TGAGCCCCTT CATAAGCTAC AAGCTCATAA TGGCTACATC CTTAAATGTC TCCTCTCTCC TGGAAACAAA TATCTAGCGA CCGCATCATC TGATAAAACT GTCAAAATAT GGAACGTTGA TGGTTTCAAA CTTGAGAAAG TTTTAACAGG ACATCGAAGA TGGGTCTGGG ACTGTGACTT CTCAAGGAAT GGAGAATATC TTGTTACCGC ATCATCTGAC ATGACGGCTA GATTGTGGTC GATGCCAGCG GGTAAAGAAG TGATGGTGTA CCATGCTCAT CGCAGAGCCA CTGTGTGTTG TACACTCCGT CATGATTAA 
Length999
Protein Sequence
Protein Residue
Map Locationscaffold_4: 604749.. 606471
Download Sequence
A.thaliana
AGI-codeAT2G22040.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias[LST8-2][Lethal with Sec Thirteen 8-2]
Gene coexpression
MR
MR Locus Description
18.7083 Ahg935351 Protein of Unknown Function (DUF239)
20.4939 Ahg908402 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
22.8035 Ahg899837 Domain of unknown function (DUF313)
24.1661 Ahg891733 Curculin-like (mannose-binding) lectin family protein
27.2764 Ahg924684
39.3954 Ahg474956 WRKY DNA-binding protein 56
42.3202 Ahg313754 beta-galactosidase 15
42.4264 Ahg913196 jacalin lectin family protein
60.3324 Ahg918906 Plant invertase/pectin methylesterase inhibitor superfamily protein
62.2093 Ahg496045 subtilase 4.13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression