Detail



ID : Ahg908402

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908402|Al_scaffold_0002_1483
Sequence
ATGGAGCTCT TTCTCAAGAT TGGTTTGGAT AATAAAACCG CAAGAAAAAC AATCGACGAC AACGAGCTGA CGTCCGATCT AACCGCCATC ATCTACGAGG CTGGTGTGTG TGATGGATGT GACAAAACAA CTGGGAATCT ACTTTACTCT GTTGCAACTA GGCTTCCTAT AAGTGCTCGT ATGCATCATT CAAAGTTGAT CAAATGCATC ATGTCCTTTA AGTTACCAGC CCAGAGGAAT GCTGCAATTA AGTATTTTGA AGATATTGAA TCTAAAGACT TCAACATGAA TGAATTTGAA GAAGCATGTG GTGTTGGGGT TGAAGTTTTA GCAGAAGATA TTGAAAAAAC TGTTAGTAAA ATCTTTGAAG AGAACATGAA CTCAATATTG GAGAAGCGAT ACCGAACTAG TGAGGGTAAA TTATTGGGAG ATGTCTTGAA AAAGTTACCT TGGGCAGATC CTCGGATTGT ACAGAAAGTC ATAGGTGAAA AAATGTATGA ATTGCTTGGT GAGAGAACAG CTGCGGATAA TGAGAAACCG GTTAAAAAGA AGGAGAAAAA GGAGAAGCCT GCCAAAGTTG AGAAGGCTCC TGCGGAAGTT GCTTCGAAGC CATCTGAAGA GGAGCTCAAT CCATATTCCA TATTCCCTAA GCCAGAGCAT AATATTAAGG TTCACACAGA GGTTTCTTTC AGTGACGGTT CTGTTCTTAG ATATAGTAAT ACTAGAGAAC TTCTTGATAA ACATTTGAAG GCTATGTATG TTAATTTTGG TCTTGCAAAG GACCGAGGTG GTTGCTGTTA TTTACGGTTT GACGATACAA ATCCGGAGGC CGAAAAAAGT GAGTATATTA CTCACATTGA AGAAATTGTT AACTGGATGG GTTGGAAACC CTTCAAGTTG TATGACTTGG CAGTGGAGTT GATCCGGAGA GGCCATGCAT ATGTTGATCA CCAGACTGGA GAAGAGGTAA AAGAGTACAG AGAGAAGAAA ATGAACAGCC CTTGGAGAGA CAGGCCTATT GAAGAATCTC TGAAACTTTT TGACGAAATG AAACGAGGAT TGTTCGAAGA AGGGAAGGCG ACGCTACGAA TGAAAATGAA TATGCAGAAT GATAACTTTA ATATCTATGA TTATGCTCAT TGCATTGTTG ATTCTCTTGA GAATATAACA CATTCGCTAT GTACACTCGA ATTTGAAACT CGACGTGCTT CTTACTACTG GCTATTACAT TCTTTGGGAC TCTACATGCC TCATGTGTGG GAATATTCAC GGTTGAATAT AACAAACACC ATGATGTCAA AGCATAAGTT GAATCAAATT GTGACAGACA AGCATGTCGA TGGTTGGGAT GATCCGCGTC TGATGACACT TGCTGGTTTG AGACGGAGGG GTGTGACTCC AACCGCGATC AATGATTTTA TACAAGGACT TGGCATTACC AGAAGTGATG GTAGTATAAT AAATATGAAT CGCCTTGAGA GTCATATTAG AGTGGAGTTG CATGAAACTG CTCCGCGAAC CATGGTGGTG GTTCATCCCC TTAAGGTGGT CATCACCAAT ATGGAATCCG ATAAGGTCAT AGAGCTTGAT GCAAAAATAT GGCCCGAAAA TAAGAGTAAC GACCCCTCAT CCTTCTACAA GGTTCCTTTC TCTAGAGTTG TATACATTGA ACGAGGCGAT TTTCGATTGA AAGATTCAAA AGATTACTAT GGGCTTGCCC CTGGTAAAAC AGTCATGCTA AGACATGGTT TCCCTATCAA ATGCACTGAT GTTGTTCTTG CTGATGACAA TGAAACTGTT GTTGAGATCC ACGCAGAGTA TGATCCTGAA AAGAAAACGA TACCAAAAAA GGGATTTTTA CACTGGGTCG CTGAACCCGC CCCTGGAAAA GAGCCATTAA AGGTCGAAGT TCGGCTATTT GACAAATTAT TTTATTCAGA GAACCCGGGA GAACTAGAGA ATTGGCTCGA CGACATTAAC ACAAACTCCA GACTGGTAGT TTCAGATGCT TTTGCTGTAC CAACACTTAA AGAAGCTGCC CTTGGGGAAA AATTCCAGTT CGAGAGACTA GGTTATTTTG TGGTTGACAA AGATTCTACC CCAGAAAAGC TAGTCTTTAA CCGGACAGTC ACACTGAAAG AAAGTTCTAG TAAACCTGGA AAGTGA 
Length2166
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12216557.. 12221030
Download Sequence
A.thaliana
AGI-codeAT1G25350.2
Descriptionglutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
TAIR curator summary
Alias[OVA9][ovule abortion 9]
Gene coexpression
MR
MR Locus Description
11 Ahg943128
18.1108 Ahg478254 eukaryotic initiation factor 4A-III
19.1833 Ahg936150 F-box family protein
20.4939 Ahg343760 Transducin/WD40 repeat-like superfamily protein
20.6155 Ahg916994 oligopeptide transporter 8
21.5639 Ahg899837 Domain of unknown function (DUF313)
23.4094 Ahg336380 Subtilisin-like serine endopeptidase family protein
25.4558 Ahg933071
26.3059 Ahg493352 HXXXD-type acyl-transferase family protein
27.3861 Ahg949333 C2H2-like zinc finger protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression