Detail



ID : Ahg345624

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|345624|fgenesh1_pg.C_scaffold_4001966
Sequence
ATGACGACGA TGATCTACGA TCTTCCAAGG GATTTGATAG AGGAGATTCT TTCTAGGCTT CCCTTGAAAT CTATGAAAGC AGTGAGGTTA ACATGCAAAA GTTGGAACAA TTTATTCAAA AGTAAAGTAA CAACACCAAC AAGAGAAGGG GAGACTATGA TGATCTTCAG GATGATGCCT GACAGTTTTT GTTTAATGAG CGGCATCGTC GATGTTGATC CATCTATAGA GCGTAAAGGT CAACTTAGTT TCCTTTACAA AGTCAGTGTA TCTAGAATTT ACCACTATGA GGGTTTAATT TTATGCAAAT TGAAAGACGT TAATAGGGTT ATGGTTTGGA ATCCCTATTT GGGGCAAACA AGGTGGATCA ACCTCAGGTA TTCTCACCTC ATAAACGGAT TCAACAGGTA CAGTTATGCT CTCGGATACG AGGATAAGGA ATCTTGCCGT AGCGTTAAAT TGTTGAGGTT TTTAGATTAT TTCTTCCATG CACCCGAAAC ACAATTTTTT TGGTATGAAA TCTACGATTT TGATTCTGGT TTATGGAAAA CCCTTGATGT CACTCCAAAC TGGGGTATAT ATTGTTCAAG CCCTAGCGTT TCTCTTAAGG GTAACACTTA CTGGTGTGCT AGTAAAAGGA GCTCAGAAGG TTGTATGGAT CATATAATAT GTTTTGATTT TACAAAAGAG AGGTTTGGGC CGCTTCTACC TCTGCCGTCT AGCGTTAGGG ATCGTAAATA TATATATGTG AATTTATCTT GTGTTAAAGA AGAGAAGCTT GCAGCTTTAT TCCAGCGCCC TGAATCATAC GAACTTTATT TTGAGATATG GATTACGACT AAGATTGAGG CCGAAATGGT GTCGTGGAGC AAGTTCTTGA GAATCGATAC GGGACCTAAG GTAAATGTTC CAGGTAGTTT CTTGATTGAC GAGGAGAAGA AAGTCTTCAT GGGTTTTTGT ACAGACTATA ACTCCGACTA TGACGACTGT CCCAAAAAAT TTATTAACAT CATTGGAGAG GCTGGATACT TAAAGAAATT GGATCTCGGA GTACCTGCAT ACCAAAACCA TTGGCTAGAT GTGTGCTCTT ATGTTCCAAG TTTGGTCCAG ATCAAGAAAC TTGCACGAGG CAAAAGGATA AAACAACGCA GTTTAGAAAA GCATCGATTT GATCAGAACA GGAGCAGAAC ACTGAGAGGA GTCGAGTTTT GGAAACGCTT TGAGGTGCTC TTGGAACCAT ATGGGAATGC TTGCATTGTG ATGCCTATCT TACAAGAAAC CAAACACAAT ATAACTAAAG AGTCTCTTGG GGTTCATTGT TACTTTTCTG CAGTAGTTGC GTGGGACGAA AGGAATGTCT TTGATTTAAG AAAGGGAAAC ACTTACTGGT GCGCTTATGA AAGGAGCTTA AACGGTCACG AGCATCATAT AATATGTTTT GATTTTACAA AAGAGAGGTT TGGACCGCTT CTGCCTCTGC CGTCTAGCAT TACGGATCAT GAATATAAAA TCGTAACTTT ATCGTGTGTT AAAGAAGAGA AGATTGCAGC TTTATTTTGG CACAAGGCAT CATATGATAC TGAGATTGAG ATATGGATTA CAACTAAGAT TGAAGCCGAA ATGGTGTCGT GGAGCAAGTT CTTGAGATTT AATACATGTT TTTTTCTTGA TACGGGACTT AAGATAGTTT TTCCAACTAC TTTCTTCATT GATGAAGAGA AGAAAGTCTT CATGGGTGTT GGTAGAGAGA ATGGCTCTGT TAGAGGTGAT TGGGACTATG ACTCTGGATA TCCCAAAACA TTTATTAACA TCATTGGAGA GGCTGGATAC TTAAAAATAT TGGATCCCGG ATTACCTAAC CAAAACCGTT GGCCACGTGT GTGCTCTTAT GTTCCAAGTT TGATCCCAAT CAAGAAACTT TCACGTGTGG GCAAAAATAT AGAACAAAGT AGTTTAGAAA AGCAACGATT TGATCAAAAC AGTTCGAGAC TTGCCGCAAT TGAAAAGCTA CGATCTGGAG GCAATGTATA CGAGGCGCAA AAGGGGGTAT TTAGACGCGT ACGCAAAATT GAGCTTGGTT GCTAA 
Length2085
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17702119.. 17705916
Download Sequence
A.thaliana
AGI-codeAT4G09143.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.05539 Ahg894206 sugar transporter 11
13.8564 Ahg896275
20.2978 Ahg358371 Pectin lyase-like superfamily protein
24.4949 Ahg341194 Homeodomain-like superfamily protein
24.9199 Ahg336810 Galactose oxidase/kelch repeat superfamily protein
27.0185 Ahg906449 Protein of Unknown Function (DUF239)
27.7849 Ahg943128
30.3974 Ahg936167 Adenine nucleotide alpha hydrolases-like superfamily protein
34.8999 Ahg316828 cytochrome P450, family 79, subfamily C, polypeptide 1
36.1801 Ahg486273 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression