Detail


ID : Ahg336810

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|336810|fgenesh1_pg.C_scaffold_1003375
Sequence
ATGAATCTTT CTCGTCTTCG AAGACTAGGG AGCAGATTAG AGAACACGGG CTGCACGCGT CTCGAAATTG TACTATCCAC TCTCTCCTTA GTCTCAAAAA GCTTTCGATC TCTCATTGCT TCACCACAGC TTTACCAGGC CCGATCTCTC TTACGCCGCA CGGAGAGTTG TCTCTATGTG TGTTTACGCT TTGACGACAA CCCTCGTTGG TTCACTCTCT TCCAGAAACC TGACCGAACC CTAACTAAGT CAAGCGGCAA TCTTTTGGTC CCAATCACAT CTCCACAATC TCATTCTGCC TACTTGTCAG ATACATCAAG ACTTTGGCAT CATCTAGCTA GGGTCTTAGT ACTAGACTGT TTGTCTCACA CGTGGCGTGA GGCTCCAAGC TTGCAGGTGA AGATTAAGTA CCCTTGTGCT AGTGTCTTTG ATGGGAAGAT TTATGTAGTA GAAGGTTTCG TAGAAAACGT ATCAGAATGT TCGAAGTCAA TGCACGTGTT TGATACGAAG ACCCAAATTT GGGATCATGT CCCAATTCCT TACCGGGTCG GGGACGAATA CTCGGATTGG CTAACCAAAA ATAGATGTAT TGAAGGAAAG TTGTATCTGA GGATTGGGAG AAAGGTCCTG GCTTACGATC CAAAGGAAGG TAGATGGGAC TTGGTGGAAC AAGAGATGAG TAATGGTTGG AAATGGTGTT TTAATTGTGC GATAGAAAAT GTTTTGTACT GCTATAATCA GGGAGCATTA GAATGGTATG ACAAGAAGGT GAGATTGTGG AAACAAATTA AAGGTTTGAG AGGACTGCCC GATGAGTTTG CTAGGTTAAG TCTTGTTAAA CTGGCGGATT ATGGTGGAAA GATGGCGGTT TTTTGGGACA AGTATGAGCG TAAAAGTGAA GGCAAGATGA TTTGGTGTGC TATGATTGCG CTCGAAAGAC ACAACACTGA AGATATTTGG GGGAATGTCG AGTGGTGTGA CGCAGTGCTT ACAGTTCCCC GATCAACATT TTTTGAGTGT GCTCTTGCTG CTACTGTTTG A
Length1041
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22096851.. 22115068
Download Sequence
A.thaliana
AGI-codeAT4G39550.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg323049
16.2173 Ahg916994 oligopeptide transporter 8
24.9199 Ahg345624
33.7935 Ahg325337 response regulator 21
55.7225 Ahg905233 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
65.6049 Ahg337030 PLAC8 family protein
66.6633 Ahg316947 Pectin lyase-like superfamily protein
67.4166 Ahg951991 Subtilisin-like serine endopeptidase family protein
73.0479 Ahg327005 Galactose oxidase/kelch repeat superfamily protein
78.1729 Ahg316416 HCO3- transporter family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression