Detail



ID : Ahg345820

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|345820|fgenesh1_pg.C_scaffold_4002162
Sequence
ATGTATGATG TGATGTTGGA TGAAGCGAAC TTGTGGTTTC ACGAAGACGA ACCTCCTCTC CGTAGGCGGA AGATCGAAGA AGCTCCACCT TCACCTGTGG AAGACCTTTA TTTCTCCGAC GAAGAAGACA TGAGTCCCGA GGAACGCGAA AAGTATCGTC TTCAAGTTGT TGAGTCCTGT GGATTCGATG TTGATTTCTT CAAGCATACG TTTAATGGGA TAATGCCAAG TGGATGTTGT CCCTATGACA CACTCTTCGC AAAGGCAGGA CTCCATTGTT ACAATCTTGA AAAGGGGAAG AACTTACAGT TCAAGACTGT AGTAAAAGTT AACGCCGAAA TCGGTTCCCT TTACAATTCC TATTCAACAT CTGAGGTGAT GGATCCGGTT AACAACTCTC TTCACACTTT CCAAACTTTA GTCACGGATG CAGGGAAGAT GAACAAAGCG CGCTTGATAC TTGTCACAAA AATATGCAGA CTTAAGCCTC AAGTACCAGG CATTGGAGAT GCAAATGGCC GTTGGGACTT TGATGCTATA GATGATTTCT ATAAAGGTGA TATGCCAGAT TGGCCACCGA ATGGTGCATG TACTAAAGGT GATAAGCTAC TACAGTTCTA TGAGGTGAAG GAATCAGAGT TGCGAGACAA TGAATGGATT TCTCTATTTG CTGAAGCTGC ATTGTTCTCC GAGTGGCACT CTGACATGAG TGCTTATACA CCATTTGAGA TGAAGAAAGT AGTGGTACAA ACAAAAGAAG ATGTAGACTC GAGTATGAAG CTCAAGTCGA GCAATGCAAT CTTCTACATG ACTTTCAAGG TTCGTGAAGG TCCCGAGTGC AGAGGGATAG TAAGAAAAAC AAGTGATGGA AGAACAGGAC ATATGCGCCT TGAAGCTAGA TGTTGGATCG ACAAGTAA 
Length918
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18642873.. 18644222
Download Sequence
A.thaliana
AGI-codeAT1G22090.1
DescriptionProtein of unknown function (DUF626)
TAIR curator summary
Alias[emb2204][embryo defective 2204]
Gene coexpression
MR
MR Locus Description
34.0734 Ahg934616 phosphorylethanolamine cytidylyltransferase 1
43.7493 Ahg330259 COP1-interacting protein 4.1
46.6369 Ahg489850 esterase/lipase/thioesterase family protein
53.6936 Ahg470389 Tetratricopeptide repeat (TPR)-like superfamily protein
70.8943 Ahg495970
73.1163 Ahg490079 Microsomal signal peptidase 25 kDa subunit (SPC25)
74.8999 Ahg479742 Endoplasmic reticulum vesicle transporter protein
79.3221 Ahg897308 phospholipase C1
86.7179 Ahg474702 sodium hydrogen exchanger 5
88.0625 Ahg494453 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression