Detail



ID : Ahg897308

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897308|Al_scaffold_0005_1274
Sequence
CTCAGCATTT TAAAGATTAC GATCTTAATC TCAACAAAGC CACCAAAAGA GTATCTTCAG ACCCAAATCT CTCAAGAGTC TTGTGTTGTG ACAGATGCAG AAGAACTGGT TCAAGAAAAA GATGTGGAGA GTGCAGCGAT CGAATACAGA GACTTAATCT CGATTCACGC TGGGAACCAC AAAGGAGGAT TGAAGAACTG CTTAAATGGA GATCCTAACC GAGACATACG GTTAAGCATC AGTGAGCAGT GGCTTGAGAC TTTGGCTAAA ACTCGTGGAC CTGATTTAGT AAAGTTCACG CAGTGGAATC TTTTGAGGAT ATATCCCAAG ACAACACGGT TCGACTCGTA TAACTATGAT CCTCTCGTTG GATCGATTCA TGGTGCTCAA ACGGTTGTCT TCAATATGCA ATTTTTTGGA TCTTTGCAAA GTACGTCGTT GAGAAAGATC TTTGGTGAGA TGAAGAAGAA AGAGAGGGTC CGAGTCAGAA TAAACCGACC CATTAGAAGT GTATAA 
Length516
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11241737.. 11242903
Download Sequence
A.thaliana
AGI-codeAT5G58670.1
Descriptionphospholipase C1
TAIR curator summaryphosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).
Alias[ATPLC][ATPLC1][PLC1][PLC1][ARABIDOPSIS THALIANA PHOSPHOLIPASE C][phospholipase C1][phospholipase C 1]
Gene coexpression
MR
MR Locus Description
39.8999 Ahg477504 Plant stearoyl-acyl-carrier-protein desaturase family protein
52.9906 Ahg930806 Tetratricopeptide repeat (TPR)-like superfamily protein
56.6657 Ahg478696 Plant protein of unknown function (DUF827)
63.8749 Ahg944516 Protein of unknown function (DUF1685)
79.3221 Ahg345820 Protein of unknown function (DUF626)
80.5543 Ahg480394 Reticulon family protein
89.6772 Ahg352314 Copper amine oxidase family protein
93.6376 Ahg950298 F-box/RNI-like/FBD-like domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression