Detail



ID : Ahg470389

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470389|fgenesh2_kg.1__343__AT1G04130.1
Sequence
TTTTGCTTTC TATCTTTCTG CTGCGAATCA ATGGCGCTAT GGATGGACGC TGGAGCGACG CCTACAACGG AGAACGAAAA GGCTGATCTT GAAGCTATTT CTGCTCTCAA AGAATCCGCC GCCATCGAAT TCAAAGAACA GGGCAATGAC TGTGTAAGGA AAGGGAAAAA GCATTACTCC GAGGCGATTG ATTGTTACAC GAAAGCCATT AATCAGGGAG TTCTAAGTGA CTCAGAGACC TCAATTTTGT TCTCGAATCG ATCCCATGTT AATCTACTCT TAGGCAACTA TCGGCGTGCC CTCGCGGATG CTGAGGAATC AATGAGGTTA TGTCCTCATA ACGTTAAGGC GGTGTATCGA GCTGCAAAGG CATCAATGTC ATTGGATTTG CTGAACGAAG CAAAGTCTTA TTGTGAAAAG GGAATCGAGA ATGATCCAAG TAATGAGGAC ATGAAGAAGC TTTTGAAACT GGTGAATTCA AAGAAGCAAG AAAAAGAACA ACACGAGGCT CAAGTCTCAA GGGCTGTGGT TGAAGCCAAG GCTTGTCTCT CTGCGATCGA GAACAGAGGA GTGAAGATTG GCAAAGCAAT GTACCGAGAA CTCACGGGTT TGAAGAAGCC AATGTTAGAT AAAAACAACA TCCTTCATTG GCCTGTCCTG CTTCTTTACG CTGAGGCCAT GACAAGTGAC TTTGTCGAGG ACTTTTGTGA AACAGACATG TTTGCAACTC ATCTTGATAT GATGTTTTTA GAGGACAGCC CGCCGCTGCC ATGGGATATA AACAACGAAT ACTCGCGGGA TGTTATTGAG CTTTACTATG AGGCGAGTTC AGGAACTCCA TTGCCTAGGA GTAGAGTTCT CCAGTATCTT CTAGAAGGTA CAAAAGGTTC TCAAGCTGAA ACTACCGGTG AAGAGGACAC AAGTGTAACC AAAACACCCT CCTACATGAA AGGTTCTTCG GGTATGGTTA AAGTGAACGA GAGAAGAACA TTGCATGACG TGTTGAAAGA ACCTAAGTTT GTCATCCCTG AGATTCCAGT CTTCTACATC GTATCAAAGA GGTCTAAATT CTACAAGGAC TTTATCGCTG GAAAATGGAG TCCACCAAAT TAGAGAATTG AGTTCTAAAG AGAATGCTTA CTGATAGTTT TAAGAAACAA CCGATTATAA GATAATAACA GTTTCAGAAA ATGTTACCGT TTAAAGACCC AAACCTGTTC CCCATCTTAA CGAAGAGACT TAGACTCCGC CACTTTTCTA GGTAACAAAA GAAAAAATAG AGTGGAAAAA AGATCTTACA GAGG 
Length1304
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1224441.. 1227271
Download Sequence
A.thaliana
AGI-codeAT1G04130.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[AtTPR2][TPR2][tetratricopeptide repeat 2]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg940793 Pentatricopeptide repeat (PPR) superfamily protein
11.3578 Ahg495713
16.1864 Ahg497405 Transducin/WD40 repeat-like superfamily protein
21.4942 Ahg936279 Integrase-type DNA-binding superfamily protein
25.1396 Ahg943471 Homeodomain-like superfamily protein
31.9374 Ahg473976 root hair initiation protein root hairless 1 (RHL1)
38.7298 Ahg925691 Arginyl-tRNA synthetase, class Ic
41.7133 Ahg945493 pumilio 6
45.9565 Ahg342721
53.6936 Ahg345820 Protein of unknown function (DUF626)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression