Detail



ID : Ahg348107

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348107|fgenesh1_pg.C_scaffold_5001499
Sequence
ATGACCAAAA CCCGGATTCT CAACCCGACC CGATTCCCTT CTCCCAAACC CTTACGTGGA GGCGGCGACG CTAACTTCAT GGAACAGCTC CTCCTCCACT GCGCTACCGC CATAGACTCC AACGACGCCG CATTGACTCA CCAAATCCTC TGGGTGCTCA ACAACATCGC CCCATCAGAC GGTGACTCCA CACAACGACT TACCTCCGCC TTCCTCCGCG CGTTGCTCTC ACGCGCCGTC TCCAAAACCC CTACACTATC ATCCACCATT AGTTTCCTAC CTCCGGCCGA CGAACTCCAC CGGTTCTCAG TCGTGGAGCT AGCTGCATTC GTAGACCTCA CTCCGTGGCA CAGGTTCGGA TTCATAGCAG CCAACGCCGC GATCTTAACC GCCGTGGAAG GTTACTCAAC GGTTCACATC GTTGACTTAA GTTTGACTCA TTGTATGCAA ATTCCTACTC TCATAGACGC CATGGCAAGA CGACTCAACA AACCTCCTCC GCTTCTTAAA CTCACCGTCG TCTCTTCCTC CGACGACTTC CCACCATTCA TCAACATCTC ATACGAAGAA CTCGGATCCA AACTCGTAAA CTTCGCCACC ACACGAAACA TAACAATGGA GTTCACAATC ATACCTTCTA CTTACTCCGA TGGCTTCTCT TCTCTACTCC AACAATTACG TATTTACCCT TCTTCATTCA ACGAAGCTCT CGTCGTCAAC TGTCATATGA TGCTCCGTTA TATCCCTGAA GAAACCCTAA CTTCATCATC ATCATCTCTC CGAACAGTTT TCTTGAAAAC ACTCCGATCT TTGAATCCAA GAATCGTAAC CCTAATCGAA GAAGACGTAG ATCTCACATC GGAGGGTTTG GTTAACCGGT TAAAATCGGC GTTTAACTAC TTCTGGATCC CGTTCGATAC GACGGACACG TTAATGAGCG AGCAAAGACG GTGGTACGAG GCGGAGATAA GTTGGAAGAT AGAAAACGTG GTGGCGAAGG AAGGTGCGGA GAGGGTGGAG AGATTGGAGC CGAAGAGACG GTGGATAGAG AGGATGAGAG AGGCTGAGTT CGGCGGAGTT AGGGTTAAGG AAGAGGCGGT GGCTGATGTG AAGGCGATGC TGGAGGAGCA CGCCGTCGGG TGGGGAATGA AGACGGAAGA CGACGACGAG AGTCTTGTGC TGACGTGGAA AGGATCTCAT ATGGAAACAA ACACTGCCAA AACTTTTTCT TTTATCGATT TTGAAAAATT TGACATAACC ATAACTACTG ATATCTCTGA CGTTAAAGCC AATTTCAAAA GCGCAATAGC TGAAAAGGGA TTTGGAGTTA CGGATTCAAC TGCTCCAAAT GATACTATTG GGCCTCAATA TGTAAATGAT ATTGATCCTG TCAGACTACC TAGTTGCCCA CCACAGCCTG ATTTCAGCAC CGCCAGAACC GCAGTTTGGT GGGACGTGGA CAGCTGCAGA CTTCCTGAAG GCTTCGACCC CTACTGA 
Length1497
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14029001.. 14031818
Download Sequence
A.thaliana
AGI-codeAT3G49950.1
DescriptionGRAS family transcription factor
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
26.1151 Ahg903098
35.6651 Ahg926950 Leucine-rich receptor-like protein kinase family protein
45.1664 Ahg475096 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
48.6518 Ahg891276
67.6683 Ahg892095 laccase 10
68.6294 Ahg490024 Predicted AT-hook DNA-binding family protein
82.553 Ahg496986 Chalcone-flavanone isomerase family protein
83.2827 Ahg947764 Peroxidase superfamily protein
84.3801 Ahg357417 Protein kinase superfamily protein
91.214 Ahg485384 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression