Detail



ID : Ahg926950

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926950|scaffold_202511.1
Sequence
TCTTTCCTTT CTCCACTCTA ATGGCCGCAA CGGTCATTTT CTTCCTTCAC TTCACCGCCG TCTTCTTCTC CAGATTCCAC CATACTTCCG CCGTCTCATC AGAGATTCTA GCACTCACAT CTTTCAAACT CTCACTCCAT GACCCTTTAG GAGCTCTCGA ATCATGGAAT CAATCATCTC CATCAGCTCC ATGCGACTGG CACGGCGTTT CTTGCTTCTC CGGCCGTGTC CGTGAGCTTC GTCTGCCTCG TCTTCGCCTC ACCGGTCACC TCAGTCCTCG ACTCGGTGAG TTGACTCAGC TCCGTAAACT CAGTCTTCAC ACCAACGACA TAAACGGCGC CGTTCCTTCT TCTTTCTCTC GTTGTGTCTT CCTTAGAGCG CTTTATCTTC ACCACAACTC CTTCTCCGGC GATTTTCCAC CGGAGATACT GAATCTCAGG AATCTCCAAG TGCTCAACGT TGCTCATAAC TCACTCACCG GGAATATCTC CGACGTTACA GTCTCAAAGA GTCTCCGTTA CGTCGATTTA TCTTCCAATG CATTATCCAG TGAGATTCCG GCGAATTTCT CGGCGGATTC ATCTCTCCAG CTCATCAACC TCTCGTTCAA CCGTTTTTCC GGTGAGATCC CGGCGACATT GGGGCAGCTA CAAGACCTAG AGTATCTATG GCTAGACTCA AACCAGTTAC AAGGTACACT ACCATCTGCA TTAGCCAACT GTTCGTCGCT TATACACTTC AGCGTAACCG GAAATTCACT CACCGGTCTA ATTCCGGCGA CTTTCGGGAA GATTCGAAGC CTCCAAGTGA TTTCATTATC GGAAAATTCA CTTACCGGTA CAGTTCCGGC GAGTCTTGTA TGTGGCTCTT CAGGTTACAA TTCCTCCATG CGAATCATTC AATTGGGAGT TAATAACTTC ACGAGAATAG CTAAGCCATC GTCAAACGCA GCTTGCGTGA ACCCTAATTT GGAGATTCTC GACATTCACG AGAATCGCAT TAATGGCGAT TTTCCCGCGT GGTTGACAGA TTTGACCTCT TTAGTGGTTT TGGATATATC TGGAAACGGT TTCTCCGGCG GTTTTCCGGA TAAGGTTGGG AACTTTGCGG CGCTTCAGGA GCTGAGAGTG GCAAACAATT CACTCGTTGG GGAAATTCCG ACGAGTATCG GAGATTGTAG ATCGTTACGA GTCGTTGATT TCGAAGGAAA CAGGTTCTCG GGTCAGATTC CGGGTTTTCT AAGTCAGTTA GGGAGCCTGA CAACGATATC TCTTGGAAGA AACGGGTTCT CGGGTCGGAT TCCGTCGGAT CTTCTCAGCT TACACGGACT TGAAACATTG AATCTCAATG AAAATCATCT CACCGGAACT ATACCGTCGG AGATAACGAA GCTAGCTAAT CTCAGCATCC TTAATCTCAG TTTCAACAGA TTCTCCGGCG AAATTCCGTC TAATGTGGGT GATCTAAAGA GCGTGAGTGT TCTAAACATA AGTGGGTGCG GGTTAACGGG TCGGATACCG GTTAGCGTCG GTGGATTAAT GAAGCTTCAG GTCTTGGATT TAAGTAAACA GAGAATCTCC GGTGAATTAC CTGTCGAACT CTTTGGCTTG CCGGATCTTC AAGTGGTTGC TCTTGGAAAC AATGCACTTG ACGGCGTTGT ACCGGAAGGT TTTAGCAGTT TGGTTAGTCT TCGGTTCTTA AATCTCAGTT CCAACTTATT CTCCGGTCAT ATCCCAAAGA ACTATGGATT TCTCAAGTCA TTACAAGTGC TTTCGTTGTC TCATAATCGG ATCTCCGGTT CAATCCCGCC GGAGATTGGG AATTGTACCA GTCTTGAGGT TCTTGAGCTC AGTTCAAACC GGTTAAAGGG TCACATTCCG GTTTACGTTT CTAAATTGTC TCGTCTGAGG AAACTTGATT TGAGTCACAA CAGTTTAACA GGGAGTATTC CGGATCAGAT TTCTAAGGAT TCGTCTCTTG AATCTCTCTT GCTGAATTCG AATTCTCTAT CAGGTCGAAT ACCGGAATCT TTTTCAAGAT TGACGAACCT AACATCGTTG GATCTTTCGT CTAACAGATT GAATTCTACT ATACCATCAA GTCTCTCTCG GCTTCATTCC TTGAACTACT TCAACTTATC AAGAAACAGT TTGGAAGGGC AGATTCCAGA AGTTTTAGCT GCGCGTTTCA CTAACCCGTC GGTCTTTGTC AATAACCCGA GACTCTGCGG TAAACCGCTT GGTATAGAAT GTCCAAACGT TCGGCGGAGA AGAAGAAGAA AGCTAATTCT ACTAGTGACA CTAGCAGTTG CTGGAGCTTT ATTGCTGTTA CTCTGTTGTT GTGGTTATGT GTTCAGTTTA TGGAGATGGC GGAACAAAAT AAGATCGGGC TTGAGTCGGG ACAAGAAAGG GACCCCGTCA CGTACATCTC GAGCGAGTTC TGGTGGGACA AGAGGAGAAG ACAACAATGG TGGGCCTAAA CTTGTGATGT TCAATAACAA GATCACATTA GCCGAAACCT TAGAAGCCAC ACGACAATTC GACGAAGAAA ACGTATTGAG TCGAGGAAGG TACGGGTTGG TTTTCAAGGC AACGTTTAGA GACGGGATGG TTCTATCGGT TCGTAGACTC ATGGACGGTG CTTCGATAAC TGACGCAACG TTCCGTAACC AAGCTGAGGC TTTAGGTAGA GTGAAGCACA AGAACATCAC TGTCTTGAGA GGTTATTACT GCGGACCGCC CGATCTAAGA CTTCTAGTTT ACGACTACAT GCCCAACGGA AACCTCTCAA CGCTTTTGCA AGAAGCATCT CACCAAGACG GACACGTCTT GAACTGGCCG ATGCGTCATC TCATCGCCCT CGGAATCGCT AGAGGACTCT CCTTTTTGCA TTCTTTAGCA ATCATTCACG GCGATCTTAA ACCGCAAAAC GTTCTCTTCG ACGCTGACTT TGAAGCGCAT TTGTCAGAAT TCGGGTTAGA TAGATTGACG GCGTTGACTC CAGCTGAAGA ACCGTCTACA TCATCCACTC CCGTCGGGTC TTTAGGCTAC ATTGCACCGG AAGCGGCATT AACGGGTGAA CCAAGTAAAG AGAGTGACGT GTACAGCTTC GGGATCGTGT TGTTAGAGAT TTTAACGGGG AAAAAGGCAG TGATGTTTAC AGAGGATGAA GATATAGTGA AATGGGTGAA GAGACAGTTA CAAAAAGGTC AAATCGTTGA GTTGCTTGAA CCGGGTTTGT TGGAGCTTGA CCCGGAAAGT TCAGAGTGGG AAGAGTTCTT GTTAGGGATT AAAGTTGGGT TGTTGTGTAC CGGAGGAGAC GTCGTTGATC GTCCGTCTAT GGCTGATGTT GTTTTCATGC TCGAAGGGTG TAGAGTCGGT CCGGCGATTT CCTTGTCCGC CGATCCTACT TCACCTACTT CCCCAGCCGC CACCGCCGCT TCTTGAAATA GCTTTATCTT TTCACA 
Length3466
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15844709.. 15848174
Download Sequence
A.thaliana
AGI-codeAT1G75640.1
DescriptionLeucine-rich receptor-like protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg338071 GRAS family transcription factor
9.16515 Ahg496986 Chalcone-flavanone isomerase family protein
10.9545 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.5647 Ahg942985 Papain family cysteine protease
20.4206 Ahg494222 Pectin lyase-like superfamily protein
21.2132 Ahg494151
29.8496 Ahg475096 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
35.6651 Ahg348107 GRAS family transcription factor
43.7493 Ahg357521 ABC-2 type transporter family protein
43.7607 Ahg947764 Peroxidase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression